Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04340 ATGAAGAAACCAAAGCAGACCCAAATGAACCCTAATTGGGTTCAACTCAAACAAAAACTGAATCTTAATGGCCCAAAACTTTCAAGGAACTTCAATGATTCTGATGATGACACTCCAAATTCAATATTggGGAAACGTAAAGAgaggtttgatgatgatgatgaggattcTGATGATTGTGAGATTAACCCTCTTGCTCCTGTAAATGATGATGCAAGTTTGACAGATGTTGTGGCCATGGATTGTGAAATGGTTGGGGTTGGTCAAGGAAACAAAAGTGCCCTTGCAAGAGTAACTCTGGTTAACAAGTGGGGTAATGTTATTTATGACGAGTTTGTACGGCCAATGGAGCGGGTTGTTGACTTCCGTACTAAAATTAGTGGCATAAGACCTCGAGATCTGAGAAAAGCAAAGGATTTTTCCACTGCTCAGAAGAAGGTGGCAGAGTTGATCCACGGAAGGATCCTTGTAGGTCATGCCTTGTCCAATGATCTTAAGGCATTATTATTAAGTCATCCGAAAAAGGATATACGAGATACCTCCGAGTATCCGCCTTTTCTAAGGTCAAGTGGTAGAGTAGCATTGCGGCATCTCGCTTCGGAACATCTTGGTGCTAAGATTCAAACAGGAGAGCACTGCCCGATAGATGATGCCCGTGCTGCTATGATGCTTTAccagaaaaatagaaaagaatgGGAAAAGAGCATAAAAGGTAACTTTCGGTCCAAACAGAAGCAAAAGAAACGGAAGAAGATAAAAGATGCAGAATAA 771 0.3891 MKKPKQTQMNPNWVQLKQKLNLNGPKLSRNFNDSDDDTPNSILGKRKERFDDDDEDSDDCEINPLAPVNDDASLTDVVAMDCEMVGVGQGNKSALARVTLVNKWGNVIYDEFVRPMERVVDFRTKISGIRPRDLRKAKDFSTAQKKVAELIHGRILVGHALSNDLKALLLSHPKKDIRDTSEYPPFLRSSGRVALRHLASEHLGAKIQTGEHCPIDDARAAMMLYQKNRKEWEKSIKGNFRSKQKQKKRKKIKDAE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04340 256 MobiDBLite consensus disorder prediction 235 256 - -
Tsu02g04340 256 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 55 253 - -
Tsu02g04340 256 SMART exoiiiendus 76 234 IPR013520 -
Tsu02g04340 256 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 55 253 IPR034920 -
Tsu02g04340 256 Gene3D - 72 252 IPR036397 GO:0003676
Tsu02g04340 256 MobiDBLite consensus disorder prediction 24 58 - -
Tsu02g04340 256 Coils Coil 215 235 - -
Tsu02g04340 256 SUPERFAMILY Ribonuclease H-like 77 231 IPR012337 -
Tsu02g04340 256 MobiDBLite consensus disorder prediction 24 38 - -
Tsu02g04340 256 Pfam Exonuclease 78 225 IPR013520 -
Tsu02g04340 256 CDD REX4_like 78 226 IPR037431 GO:0006364|GO:0008408
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04340 77 231 C2H2 Transcription Factor Family AT5G40310 37.427 6.13e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04340 K18327 - gmx:100819122 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04340 02 51976443 51980784 Tsu02g04340 02 51976443 51980784 ECH