Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04334 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGCCTTATTCTCCTCATCAAAAGGTATCATCATCATCCACAATGTCAAATATAACCTCCACGACCACCACCACGACTACAGCTACGACTCTCAATAATACTTCTGACCAACAATTACCATCATGGATGGACGAATTTCTCGACTTCTCCTCGGTAAGACGAGGAGCTCATCGACGTTCTGCTAGTGACTCAATTGCCTTCCTCGAGACATCTTTTCTAGAGGAAGACTGTAGaagtggtggtggaggaggTGGTGACTTTGATAGACTGGATGATGACCAATTTATTTCTATGTTCTCCGACAATGTTGCTGGTGTCTCTTTCCCGCCTCCACCGTTGTCGTCAACCTCTAACCCGTCGTCGCCGTCCTCCGACCAAAATAGTAACAATAATGAAGAGAAACCAATGGCAATGGTGATGGATGCACCACCTCAAGAGCATTATCTTCATCATCATGGGGTGAAGCCTAAGGATGAAGCAGTTGATGATGAAATAGAGGCGGCGGCAGGGCCGTCATCCACCACAACCATCACCTGCACTGAAACCGTTGTTGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACCGCCAATCAGCTCAGAGGTCAAGGGtgagaaagcttcaatacattTCTGAGCTTGAAAGGAGTGTAACATCTTTGCAGACAGAAGTTTCAGCATTATCACCACGAGTTGCATTCTTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTAAAGCAACGGATTGCAGCATTGGCACAGGACAAGCTTTTCAAAGATgCTCATCAAGAAGCATTAAAGAAGGAAATAGAAAGGTTGAGGCAAATATATCACCAACAAAACATACAAAAGATGGGCAATTCAgtcaacaataataacaatggCAATTCTCTTCAATCTCCACCAACATCACAACCACAACAACACTCTTTCCACAAGGAGCAACTCCTTAGTTaa 1008 0.4157 MAQLPPKIPTIPQNWPYSPHQKVSSSSTMSNITSTTTTTTTATTLNNTSDQQLPSWMDEFLDFSSVRRGAHRRSASDSIAFLETSFLEEDCRSGGGGGGDFDRLDDDQFISMFSDNVAGVSFPPPPLSSTSNPSSPSSDQNSNNNEEKPMAMVMDAPPQEHYLHHHGVKPKDEAVDDEIEAAAGPSSTTTITCTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKLFKDAHQEALKKEIERLRQIYHQQNIQKMGNSVNNNNNGNSLQSPPTSQPQQHSFHKEQLLS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04334 335 SUPERFAMILY Leucine zipper domain 201 255 IPR046347 GO:0003700|GO:0006355
Tsu02g04334 335 MobiDBLite consensus disorder prediction 132 146 - -
Tsu02g04334 335 Gene3D - 200 252 - -
Tsu02g04334 335 MobiDBLite consensus disorder prediction 302 335 - -
Tsu02g04334 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 251 IPR004827 GO:0003700|GO:0006355
Tsu02g04334 335 MobiDBLite consensus disorder prediction 1 50 - -
Tsu02g04334 335 CDD bZIP_plant_RF2 202 252 IPR044759 GO:0003700|GO:0006355
Tsu02g04334 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Tsu02g04334 335 PANTHER BASIC LEUCINE ZIPPER 2 1 321 - -
Tsu02g04334 335 Coils Coil 280 300 - -
Tsu02g04334 335 Pfam bZIP transcription factor 201 246 IPR004827 GO:0003700|GO:0006355
Tsu02g04334 335 PANTHER BASIC LEUCINE ZIPPER 34 1 321 - -
Tsu02g04334 335 MobiDBLite consensus disorder prediction 116 146 - -
Tsu02g04334 335 SMART brlzneu 197 261 IPR004827 GO:0003700|GO:0006355
Tsu02g04334 335 MobiDBLite consensus disorder prediction 14 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04334 Tsu-Chr2 51923555 51927365 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04334 1 279 bZIP Transcription Factor Family AT3G58120 51.456 1.76e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g04334 bZIP_1 1.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04334 - - lja:Lj0g3v0133049.1 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04334 02 51923555 51927365 Tsu02g04334 02 51923555 51927365 ECH