Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04320 ATGAACGGTGGAGAGATAGTGGAAGTTGACGGCGGTCACATTATAAGGTCAAGAGGTAGAAAAGATCGTCATAGTAAAGTTTGCACGGCGAAAGGGCCGAGAGATAGACGTGTCCGTCTCTCGGCCCATACCGCCATTGAATTTTATGATGTTCAAGATCGATTGGGCTTTGATAGGCCCAGTAAAGCCCTTGATTGGCTCATTAATAAAGCTAAGCCCGCCATCGATCAACTTGATCAACTTCCTCCATGGAAACCAACTCTTCTAactaaacaacaacaacaacagcaaaaCGACGACGTTTCGGAGAAACTGAACGGTAACGGTGACGGAAATGAAAACGAAAACGAGTTTCGTTTTCTTCAGAATTTTAACAGCAATAACAGCGGTTTTGTTCCGTTTGAAAGTGAAATTGGTGAAACGACGTCGTCTTCCCCGATTCAGTTTCCTGATTTGCTTTCGAGAACGAATAGCAATGATTTGAGGCTTTCGTTGCAACAGAATCAGCACGTGCAACCGCACGTGCTTTTCACCGGGAATTTTGATGGAATGTTAGCGTGGAATTCCGGTGGTGGTGCTGCTGCTATTGATACTGGTGGTagcggtggtggtggtggtaatAATGATGATGCTTCAGGTGGAGGTTTTGTGTTTAATACTCCTTCACCGTCGCCGGTGGTTTTTCCGGCGGTGATGTATGGTCAGAATCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGATAGATGCTGCTGATTATCGACGTCAGGTGGCTGCCACAGCTGCTTTGGGTGCCGGATTTGCTTCTGGTGGCTTTTCTGGTTTCCGTGTGCCGGCACGAATTGGAGGCGATGATGATGAGGTGCATGGCGGTTTATCTAACAGGCCGTCGTCAGCTTCCTCAGATTCTCGCCGTTGA 945 0.4529 MNGGEIVEVDGGHIIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKPAIDQLDQLPPWKPTLLTKQQQQQQNDDVSEKLNGNGDGNENENEFRFLQNFNSNNSGFVPFESEIGETTSSSPIQFPDLLSRTNSNDLRLSLQQNQHVQPHVLFTGNFDGMLAWNSGGGAAAIDTGGSGGGGGNNDDASGGGFVFNTPSPSPVVFPAVMYGQNQYLSQRGPLQSSYNPSVRAWIDAADYRRQVAATAALGAGFASGGFSGFRVPARIGGDDDEVHGGLSNRPSSASSDSRR 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04320 314 PANTHER TRANSCRIPTION FACTOR TCP4 169 313 - -
Tsu02g04320 314 PANTHER TRANSCRIPTION FACTOR TCP4 2 117 - -
Tsu02g04320 314 ProSiteProfiles TCP domain profile. 20 78 IPR017887 -
Tsu02g04320 314 MobiDBLite consensus disorder prediction 292 314 - -
Tsu02g04320 314 MobiDBLite consensus disorder prediction 1 27 - -
Tsu02g04320 314 Pfam TCP family transcription factor 19 122 IPR017887 -
Tsu02g04320 314 MobiDBLite consensus disorder prediction 89 115 - -
Tsu02g04320 314 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 169 313 IPR005333 GO:0003700
Tsu02g04320 314 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 117 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04320 Tsu-Chr2 51719162 51720913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04320 4 314 TCP Transcription Factor Family AT3G15030 41.584 1.00e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu02g04320 TCP 6.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04320 - - cam:101504111 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04997 02 58998833 59002276 Tsu02g04320 02 51719162 51720913 ECH
Tsu02g02962 02 32625625 32626877 Tsu02g04320 02 51719162 51720913 ECH
Tsu02g04320 02 51719162 51720913 Tsu02g04320 02 51719162 51720913 ECH