Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04309 ATGAAGAGACTTCTAATAAGCTGGAAGGGTTACTTGGAATTCTGTTTGTCCTCCCTGATTCATATGTTGATCCTGTGTAACAGGACTACTGTgTTTTTACCGGAATCGTCCTCCGGTTCTATCTCCGACAACGAATTTCCAGCATCGTGTTGTTCGAACAATGGATCCATTGGAATCACTGAAGAAAGGATCAGATCGTTAGATCTAGAGGGAGATGAGGACATTGCATTCAGGAAGATTAGGTTGAGGGCTGAAGATGTTCAAGGCGAAAATCACTTGACCAACTTTTGGGGCATGGATTTTGCCACTGAAAAGCTTAGGTCATTGATGCGAAAATGGCAAACTCTAATTGGAGCTCATATTGATGTTAAgatcattgataattatacaTTGTAG 396 0.3965 MKRLLISWKGYLEFCLSSLIHMLILCNRTTVFLPESSSGSISDNEFPASCCSNNGSIGITEERIRSLDLEGDEDIAFRKIRLRAEDVQGENHLTNFWGMDFATEKLRSLMRKWQTLIGAHIDVKIIDNYTL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04309 131 SMART Ribosomal_S3Ae_2 36 131 IPR001593 GO:0003735|GO:0005840|GO:0006412
Tsu02g04309 131 PANTHER 40S RIBOSOMAL PROTEIN S3A 65 131 - -
Tsu02g04309 131 Pfam Ribosomal S3Ae family 67 131 IPR001593 GO:0003735|GO:0005840|GO:0006412
Tsu02g04309 131 PANTHER 40S RIBOSOMAL PROTEIN S3A 65 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04309 Tsu-Chr2 51538007 51539172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04309 68 131 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 75.000 9.54e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04309 K02984 - gmx:100813273 112.079