Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04265 ATGACAACAACAACCTTCACTCAATTCTACGAATCATGGTACTCACAATTCAAAAACTTAATCAACCAACTAACAATTTCATCATCTCAAACACAAAACTCAGAAGAACTTATCCTTAAAGTTATGTCTCACTATGAAGATTATTACAATGCTAAATCAATGGCTGCTGAGAAAGATCCTTTACACGTGTTATCATCTCCTTGGGCTACTTCACTTGAACGTTCACTTCATTGGATTGCTGGTTGGAGACCCACTACAGCTTTTCATCTGATATATACTGaatcttctcttctttttgaGTCTCACATTGTTGATATTCTTCGTGGGTTTACTACTGGTGATCTTGGTGATCTTTCTCCTAATCAGTTTCGTCGTGTTAGTGACTTGCAATGTGATACTGTGAAAGAAGAGAATGCAATAACGGAGGAGCTATCAGAGTGGCAGGACAGTGCAAGTGATATGATGGGTTTAGAGTCTGATGTCAACAACAAGATCGAACGGCTGGTAAGCATTATAAAGAAAGCGGATAATCTACGGCTAAGAACATTGCGGAGCATGGTAGAGTTCCTGTCACCCCAGCAGGCTATTGAGTTCTTGATTGCTTCAGCTGAGTTGACCGTTGGGATACGCGGTTGGGGATTGAATCATGACCGTTCGCGTCCTAGGATAtga 672 0.3988 MTTTTFTQFYESWYSQFKNLINQLTISSSQTQNSEELILKVMSHYEDYYNAKSMAAEKDPLHVLSSPWATSLERSLHWIAGWRPTTAFHLIYTESSLLFESHIVDILRGFTTGDLGDLSPNQFRRVSDLQCDTVKEENAITEELSEWQDSASDMMGLESDVNNKIERLVSIIKKADNLRLRTLRSMVEFLSPQQAIEFLIASAELTVGIRGWGLNHDRSRPRI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04265 223 PANTHER - 3 220 - -
Tsu02g04265 223 Pfam Seed dormancy control 19 93 IPR025422 GO:0006351|GO:0043565
Tsu02g04265 223 ProSiteProfiles DOG1 domain profile. 3 219 IPR025422 GO:0006351|GO:0043565
Tsu02g04265 223 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 3 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04265 Tsu-Chr2 50704284 50707003 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04265 10 211 bZIP Transcription Factor Family AT5G06960 26.577 3.05e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04265 - - gmx:778192 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04265 02 50704284 50707003 Tsu02g04265 02 50704284 50707003 ECH