Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04224 ATGGAGAATCAAAATCCTTCAAATTGTAGAAAGCAAATTATGGAACAAGAATTAATTAGAGGACGTGACACAGCACATCAATTACTTGAAGTAATTGTGAACAAATTGAATGTTAATCTTCATCACCATGGAGATTTAGAAGGGTTAATAATACCATTAGCTCAAGATCTTGTTAACAAGGTACTTAGATCATTCACAAATACTCTTTTTCTATTGAACACTAACAATGATATCTTCAGCGATGAGGAAGTGTTGCCTATTAAAGATTTGTCATCACCAGCAAAGTGTCCAAAGCTTGAAGAAACAAATCATGAAGCTTGCAAGAGTTATAAACTTCAAAGAGGGTGCTACAAAAGAAAGTCAAATGCAATTACTTGGGAGAAGGACAGCTCAGTTTTGATTGAAGATGGCTATGAATGGAGAAAGTATGGACAAAAAAAGATAATGAAGGCAAAATATCTCAGGAGCTACTACAGATGCAGTTACAAAAGTGAAGAAGATTGTAGAGCTATGAAACAAGTACAGAGAGTTCAAGAGGATCCTCCATTATACAGAACCACATATTATGGCCATCATAATTGCAAAACCTCTTCATCAAATTCAGATATCACATTTTTGGAACCTAATAATACTTCATCTATGATCATTAACTTCAATGATAGCTTCCAAACCAAAGAACAATACCCTGCATTTTCAACATCACTTTCTGCATCCACAAAACAAGAGCCTATAGATCAAGTGATTAATCCCTATCATAATCACATTGCTCACAACCAATTAATCTCATCAGATTATTACCCTCTCTCATGTGATTATGAACTTGAATTTGATTATTTGAGGCATGCTACTATGTTATCATCCACTCAATCTGTTGAATTTGATTCCAAAGCATGTTTTGgtcaataa 906 0.3377 MENQNPSNCRKQIMEQELIRGRDTAHQLLEVIVNKLNVNLHHHGDLEGLIIPLAQDLVNKVLRSFTNTLFLLNTNNDIFSDEEVLPIKDLSSPAKCPKLEETNHEACKSYKLQRGCYKRKSNAITWEKDSSVLIEDGYEWRKYGQKKIMKAKYLRSYYRCSYKSEEDCRAMKQVQRVQEDPPLYRTTYYGHHNCKTSSSNSDITFLEPNNTSSMIINFNDSFQTKEQYPAFSTSLSASTKQEPIDQVINPYHNHIAHNQLISSDYYPLSCDYELEFDYLRHATMLSSTQSVEFDSKACFGQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04224 301 ProSiteProfiles WRKY domain profile. 129 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g04224 301 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 295 - -
Tsu02g04224 301 Pfam WRKY DNA -binding domain 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g04224 301 Gene3D WRKY domain 106 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g04224 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 295 IPR044810 GO:0003700
Tsu02g04224 301 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g04224 301 SUPERFAMILY WRKY DNA-binding domain 131 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04224 Tsu-Chr2 50156124 50165907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04224 12 294 WRKY Transcription Factor Family AT3G56400 31.250 6.80e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g04224 WRKY 4.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04224 - - gmx:102663141 308.145