Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04223 ATGGAGAATATGGTTTGGATTCCTACAAATAGCAAAAAGGCAATGGAAGAAGAGCTATTAAGAGGACGTGACATGGCAAATCAAGTACTTGAAGTACTAACTTTTGATGATAAGTCAAATATTATTAGAGAAATAAAAGGGTCAAATTTGaagtcatcatcatcaaaagTGTTACCCTTAAGTGTTGCTGAAGATCTTGTTCGTGAGGTACTCAAATCTTTGACTAATACAATTTTGCTCTTGAATAACAATCAAGAATCTAATGAAGTGGTGGTTCCTATAACTGTTggagatttttctttgtcaacaAATTGCCACAAGGTGGAGGAGGAGGATTTAGAAAGATCTTGCAAGAAACTCAAGACTCTCAACACCAAAAATATTCCAAAAGGGTCAAACAAGAGAAAGTCAATTCCACCAACTTGGGAAAAGACTACCTCAATATTGATTGATGATGGTCATGCATGGAGAAAGTACGGACAAAAGAAGATAACAAATGCTAAATATTTCAGGAGCTACTATAGGTGCACACATATGGATGATCAATATTGTGAAGCAATTAAACATGTTCAAAGAACTCAAGAGAACCCTCCATTGTATCGAACTACATATTATGGCCATCACACTTGCCAAAGCTCTTTCCCTTCCAACTTAAATTTGGAATCCAATTTGTCTTCCGATGACTCTTCTATATTACTTAGTTTTGataacaatattttaaataaacaagAATACTCATTTTCACAACAACCATCGCCACAACCACCATCGCTGCCTCTTGCAGCTACAAAAGAGGAACCCAAGAAAGAAATTCATGATGATTACTTTTCTCAAAATCAATTGTTCTCACCACAGAACATCTTATCATGTGATTTTGaagtttattttgattatttgagaCATGTCACTATGTTATCATCGACGGAATCATTTGAGTTTGAGAATGTATATCATccattttaa 963 0.3229 MENMVWIPTNSKKAMEEELLRGRDMANQVLEVLTFDDKSNIIREIKGSNLKSSSSKVLPLSVAEDLVREVLKSLTNTILLLNNNQESNEVVVPITVGDFSLSTNCHKVEEEDLERSCKKLKTLNTKNIPKGSNKRKSIPPTWEKTTSILIDDGHAWRKYGQKKITNAKYFRSYYRCTHMDDQYCEAIKHVQRTQENPPLYRTTYYGHHTCQSSFPSNLNLESNLSSDDSSILLSFDNNILNKQEYSFSQQPSPQPPSLPLAATKEEPKKEIHDDYFSQNQLFSPQNILSCDFEVYFDYLRHVTMLSSTESFEFENVYHPF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04223 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 315 IPR044810 GO:0003700
Tsu02g04223 320 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 5 315 - -
Tsu02g04223 320 SMART WRKY_cls 150 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g04223 320 Pfam WRKY DNA -binding domain 151 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g04223 320 SUPERFAMILY WRKY DNA-binding domain 145 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g04223 320 Gene3D WRKY domain 140 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g04223 320 ProSiteProfiles WRKY domain profile. 145 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04223 Tsu-Chr2 50144002 50148180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04223 12 215 WRKY Transcription Factor Family AT5G01900 32.227 7.22e-23 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g04223 WRKY 2.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04223 - - gmx:100792193 275.404