Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04196 ATGACGTCGGGGACGAGGCTACCGACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGGAGAAGAAGAGCTATAGCTGCTAAGATTTTTTCTGGTTTGAGAATGTATGGTAACTTTAGATTACCAAAACATTGTGATAACAATGAAGTTCTTAAAGCTCTTTGTAATGATGCTGGTTGGACTGTTGAACCTGATGGAACCACTTACCGTAAGGGATGCAAGCCTTTAGAGCACATGGATATAGGCTGTGGATCATCAGCTGTAAGCCCTTGCTCATCTTACCATCCAAGCCCTGGTTCATCTTCCTTCCCAAGTCCATCTTCATCCCCTTATGCCGCAAATCGTAACACCGATGGTAATTCCCTCATTCCATGGCTCAAAAACCTCTCGACAACTTCATCTTCGGCATCATCTCCGAAACTTCCACATCCTTACCTTCATAGCGGATCCATCAGCGCTCCGGTCACACCTCCCCTGAGCTCTCCCACTTCTAGAACGCCGCAGATGAATGTTACTGACTGGGAAGAGCGGTCTGCACGGACGGGCTGGACCGGACAACATTATTCGTTTCTGCCTTCTTCCGGTCCTCCAAGCCCCGGTCGTCAAATAGTTGATCCTGAATGGTTTGCTGGGATTAAACTTCCTCATGCTAGGCCAACATCTCCAACATTCAACCTTGTTTCTCGAAATCCATTTGCTTTCAAGGAAGATGGTTATTCGGGCAGCGGTTCACGCATGTGGACCCCTGGACAGAGTGGAACATGTTCTCCGGCTATTGCAGCAGGCTCTGATAACAATGCTGACATTCCTATGTCTGAAGCCATCTCAGATGAATTTGCATTTGGAAGCAACACATTTGGGATTGTGAAGCCTTGGGAAGGAGAAAGGATCCATGAAGAATTTGTAGCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGGTGA 954 0.4717 MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFRLPKHCDNNEVLKALCNDAGWTVEPDGTTYRKGCKPLEHMDIGCGSSAVSPCSSYHPSPGSSSFPSPSSSPYAANRNTDGNSLIPWLKNLSTTSSSASSPKLPHPYLHSGSISAPVTPPLSSPTSRTPQMNVTDWEERSARTGWTGQHYSFLPSSGPPSPGRQIVDPEWFAGIKLPHARPTSPTFNLVSRNPFAFKEDGYSGSGSRMWTPGQSGTCSPAIAAGSDNNADIPMSEAISDEFAFGSNTFGIVKPWEGERIHEEFVADDLELTLGNSKTR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04196 317 MobiDBLite consensus disorder prediction 134 172 - -
Tsu02g04196 317 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 131 IPR008540 -
Tsu02g04196 317 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 317 - -
Tsu02g04196 317 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 317 IPR033264 GO:0003700|GO:0006351|GO:0009742
Tsu02g04196 317 MobiDBLite consensus disorder prediction 1 21 - -
Tsu02g04196 317 MobiDBLite consensus disorder prediction 95 116 - -
Tsu02g04196 317 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04196 Tsu-Chr2 49554053 49557725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04196 1 317 BZR Transcription Factor Family AT1G78700 66.567 3.54e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Tsu02g04196 BES1_N 1e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04196 - - mtr:MTR_2g075400 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04196 02 49554053 49557725 Tsu02g04196 02 49554053 49557725 ECH