Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04189 ATGTTTTTTCTCATGTCAAGAAGCTTCAAACATGTATCTTTGTTCATCTTTTTGTTCATGGCTTTCTCAATGTTTGGATCCAACTCTCAACTCTTACCACAAGATGAAGTGAAATTGCTACAAACAATATCAGACAAAGTACATAACTTGAATTGGAAGGTAACACAACGTTCTTGCAATGGGGATAATGGATTTGGTAACAAGATTATTGTTGAAGATAAAATTACAAGAAATGTCACGTGTGATTGTTCTTTCAATGCTAGCACCATTTGCCATGTGACAATTATCTTGTTGAAGGGTCTCAATATATCTGGAATTTTTCCTAGTGAATTTGGAAATCTCACTCAACTCACACAACTTGATCTAACTCGAAATTATCTAAATGGCTCAATTCCAAAGAGTCTTGGACGTCTTCCACTTGTGACAATATCATTTCTGGGAAATAGACTTAGTGGTCAAATTCCCTCAGAAATTGGTGATATTGTCACTCTGAAAGAACTGAATTTTGAGGATAATCTACTTGAAGGGCCTCTTCCTTCCAGCCTTGGAAATTTGAAGAACTTGCAGAAATTCATGCTTTCTGCGAATAATTTTACAGGATCAATACCAGAAtcatttggaaaactaaagaaTCTCACTAATTTTAGGATCGATGGAAGCAGTTTATCTGGAAAGATTCCGAGTTTTATCGGAAACTGGACCAAAATTGAAAGATTGGATTTGCAAGGTACATCCATGGAAGGTCCAATTCCTCCTGCTATATCTGTCTTGAAAACTTTGAAGGAATTGAGAATATCTGATTTGAAAGGACAAACAACGATGACATTTCCTAATCTGAAGGATTTGACACGCATGGTTAGACTGGAATTGAGAAATTGCTTAATCACTGGTCCTATTCCGGACTACATCGGTGAAATGGAGGGTTTAAAAACATTAGATTTGAGCTCCAACAGATTGACTGGTCCAATTCCAGATTCACTTCAGGACTTGGACTTGGAATCGATTAACTTCGTGTTTCTGACTAACAACTCTCTGAGTGGAACAATTCCAGGATGGATACTGAACAACAAACAGAACTTTGATTTATCTTTCAACAATTTTACTGAGTCTGCTGCACCTGGTTGCCAGCTCTTGGATGTGAACTTAGCTTCCAGCACCTCTCCTTCATCAAACACTTCATTGTCTTGTTTGAAGATGAACCTACCTTGTTCGGGAAAACCTCGGCATCATTCACTGTTCATAAATTGTGGAGGACCTGCAACTGAGTTTGATGGCAACGAATATGATGCTGACGGAAATTTACGTGGAATTTCAACCTTTTCTCCTAGTGTTGATGGAAAATGGGCTTATAGCAGCACAGGAGTATTTCTTGGAAATGAAAGAGCTGATTATGTGGCTGGAAATACCTTCTCTTTGAATATCAATGGCTCTGGATACTACCAAACAGCTCGCATTGCACCGATATCTCTTAACTACTTTGGCCTTTGTATGATGCAAGGAAATTATAATGTGAAACTTCATTTTGCTGAGATAATGTTTTCTAATGACCAAACATATAGCAACCTTGGAAGGCGCATATTCGATGTTTCAATTCAAggtgttaaatatttgaaagATTTTAACATTATGGAAGCAGCCGGTGGAGTTGGCAAGGGAATCACTAGGGAGTTTAATGTTGATGTCAATCAAAGCACCTTGGAAATCCACTTATCTTGGGCAGGGAAAGGAACTAATGCCATTCCTATGAGAGGTGTATATGGACCTCTTATATCTGCTATCACTGTCACCCCAAACTTTAAAATTCCATCAAATGGGTTATCTGCTGGAGCGATTGCTGGTATTGTGGTCGGATCATTGGCGCTTATCATTCTGATACTCTTTATCCTTTGGAAGATGGGTTATATCTGTGCGAAGGATCAAACGGACAAAGAGCTCCTAGAATTAAAAACAGGCTATTACAGTTTGAGACAAATAAAAGCTGCTACTAATAACTTTGATCCGGAGAATAAGATAGGCGAAGGAGGATTCGGTCCTGTTTACAAGGGTGTACTGTCAGATGGTGCTGTGATTGCTGTTAAACAGCTCTCTTCCAAATCAAAGCAAGGAAACCGCGAATTCGTTAATGAAATAGGTATGATATCGGCTTTGCAGCACCCGAATCTTGTGAAGCTTTATGGATGTTGCATTGAAGGAAACCAATTGCTGCTTGTATATGAGTACATGGAGAACAATAGTCTTGCTCGTGCTCTTTTCGGTAAACCAGAACAAAAGTTGAACTTGGACTGGAGCACGAGAATGAAGATATGTGTCGGGATAGCAAGAGGCTTAGCTTATCTTCACGAGGAATCAAGGTTGAAAATAGTTCACAGGGATATTAAGGCGACCAATGTTTTACTTGATAAGAATCTCAATGCAAAGATCTCAGATTTCGGTTTAGCCAAgcttgatgaagaagaaaatactCATATCAGCACGCGAATAGCTGGGACAATGTTAGTATTATGCCACCATATTATAAAGTTTTGA 2526 0.3793 MFFLMSRSFKHVSLFIFLFMAFSMFGSNSQLLPQDEVKLLQTISDKVHNLNWKVTQRSCNGDNGFGNKIIVEDKITRNVTCDCSFNASTICHVTIILLKGLNISGIFPSEFGNLTQLTQLDLTRNYLNGSIPKSLGRLPLVTISFLGNRLSGQIPSEIGDIVTLKELNFEDNLLEGPLPSSLGNLKNLQKFMLSANNFTGSIPESFGKLKNLTNFRIDGSSLSGKIPSFIGNWTKIERLDLQGTSMEGPIPPAISVLKTLKELRISDLKGQTTMTFPNLKDLTRMVRLELRNCLITGPIPDYIGEMEGLKTLDLSSNRLTGPIPDSLQDLDLESINFVFLTNNSLSGTIPGWILNNKQNFDLSFNNFTESAAPGCQLLDVNLASSTSPSSNTSLSCLKMNLPCSGKPRHHSLFINCGGPATEFDGNEYDADGNLRGISTFSPSVDGKWAYSSTGVFLGNERADYVAGNTFSLNINGSGYYQTARIAPISLNYFGLCMMQGNYNVKLHFAEIMFSNDQTYSNLGRRIFDVSIQGVKYLKDFNIMEAAGGVGKGITREFNVDVNQSTLEIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNGLSAGAIAGIVVGSLALIILILFILWKMGYICAKDQTDKELLELKTGYYSLRQIKAATNNFDPENKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKPEQKLNLDWSTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLDEEENTHISTRIAGTMLVLCHHIIKF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04189 841 Gene3D Phosphorylase Kinase; domain 1 632 740 - -
Tsu02g04189 841 SUPERFAMILY RNI-like 91 324 - -
Tsu02g04189 841 PANTHER - 71 831 - -
Tsu02g04189 841 Gene3D Ribonuclease Inhibitor 37 163 IPR032675 -
Tsu02g04189 841 ProSiteProfiles Protein kinase domain profile. 665 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04189 841 SUPERFAMILY Protein kinase-like (PK-like) 649 831 IPR011009 -
Tsu02g04189 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Tsu02g04189 841 Pfam Protein tyrosine and serine/threonine kinase 668 822 IPR001245 GO:0004672|GO:0006468
Tsu02g04189 841 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 831 - -
Tsu02g04189 841 Gene3D - 409 598 - -
Tsu02g04189 841 SMART serkin_6 665 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04189 841 Pfam Malectin domain 412 593 IPR021720 -
Tsu02g04189 841 Gene3D Ribonuclease Inhibitor 272 377 IPR032675 -
Tsu02g04189 841 Gene3D Ribonuclease Inhibitor 172 271 IPR032675 -
Tsu02g04189 841 Gene3D Transferase(Phosphotransferase) domain 1 741 839 - -
Tsu02g04189 841 Pfam Leucine Rich Repeat 309 330 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04189 Tsu-Chr2 49409891 49419633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04189 2 831 Receptor kinase-like Gene Family AT1G53440 61.190 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g04189 Malectin 3.6e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04189 - - gmx:100783862 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04189 02 49409891 49419633 Tsu02g04189 02 49409891 49419633 ECH