Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04186 aTGAACATTTTCTCCCAATTTCTCTTCCTTTTACTCATTGCCATTTGGTTCATATCTCTAACAGCTACTACTATTCACCCTGATGAAAAGAAAGCTCTCAAAGATATAGCTAAATCACTTGGTAAGAAGGACTGGAACTTTGACATAGATCCATGCAGCAACAAACCTAACTGGGCTACGCCTCCGGTACCTCAAGTCTCAGATAACAATGTCACCTGTGACTGCTCTGTTGCTGGTGACAACTTCTGCCATGTTATTTCAATAAGTTTGATATCCCAAAATCTCATCGGCATTCTCCCACCAGAACTGACCAGATTGCATTATCTTCAAGTTATTGACCTCTCTCTCAATTATTTGAACGGTTCAATTCCTAAAGAGTGGGGCTCCATGATGTATCTTACTAAAATTTCTCTCGTTGGAAATCGATTAACGGGTTCAATCCCAGTGGAGGTTGCAAACATATCTACTCTACAAATTTTGGAGTTATGGATCAATCAAATGTCCGGAAATATTCCTCCTGAGCTTGGGAATCTATCCCAACTTCAAATATTGCGACTTACGTCTAACAATTTTACTGGAGAACTACCTATGACATTGGCCAAACTCACTAATTTGCAAGATTTCCGAATTGAGGGCAACCAATTCTCTGGAAAGATACCTGATTATATTCAGAACTGGACACATATCCAAAATCTAATGATTCAAGGAAGTGGATTAAGTGGGCCTATTCCTTCTGGAATTTCACTTTTGAGAAACTTAACTGACTTGAGAATTAGTGATTTGGATGGATCTGAAGATGCACCTTTGCCACAACTTGATAAACTGACATCGTTACGAACTCTAATTCTAAGGAACTGCAACATCAGTGGAAAACTGCATGATTATCTTGGGACTATGACATCATTAAAAACATTAGACCTCAGCTTCAACAAATTAAGTGGAACAATTCCAAGTACCTATGCTGCCATGAAGAGTTCAAATTACATATTTTTAACTGGAAACCTTCTCACTGGCCCCATGCTGCCTTGGAGAACTTACGTTGCCGTAGATCTTTCATACAATAACTTCAGCATCAGCCAAGGGAGTCAACTATGTAACGATGAACAAGTGAACTTGTTTTCTACCACATGGGGACGAAATAACATAGCAACAGATTCGTGTTTGAGCTTTGAATGTCCGAAACCCTCATACTCCCTTTATGTAAATTGTGGTGGAAAGCAAGCAACAGTCAACAGAAAAAGTTATTATGGTGATTCAGATTTACCTGGACCAGCTAGATTCTATCACAGTCCAAAAGGAAATTGGGCATTTAGCACCACTGGTGTATTCATGGAAAGTAGTTTACTCGGAGAAAATTATTCCCCGAAAAACATCACCAAACTTACTATGGTGGATACTGAATTGTACATGAATGCACGTGTCTCTCCTATTTCTTTGACTTATTATGGGTTTTGCCTAGCAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGTTCACAGATGATCAAACTTATCGTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGAAAGCGGGTGCAAAAGGACTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGAAAGTCATAAAACCGTTCAAAGACATTGTTGTTACTAGTAATACCTTGGAGATCCGCCTGTATTGGGCTGGAAAAGGGACAATGGCTATCCCAAATAAATCAGCATATGGTCCACTTATATCAGCTATATCGGTGGAATCTGATTCTCCACCTGGAAGCATATCTGTAGGAGCTGTGTTAGGAATTGTGGTTGCAGTAATACTTATTATCATTCTAGTATTTGGTATACTTTGGTGGAAAGGATGTTTTCGAAAGAAAAACTCATTAGCAAGAGACCTGAAGAGTTTAGACCTACAAACGGGTTTATTTACCTTGAGACAAATCAAAGCAGCAAcaaacaattttcatatttccAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTGTACAAGGGATGTTTATCCAATGGCACCTTGATTGCAGTCAAACAACTTTCTTCTAAATCAAGGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAACTCCATGGTTGTTGTGTGGAGAGAGATCAGTTATTGCTGATATATGAATACTTGGAAAACAATAGTCTAGCTCGAGCTTTATTTGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCTACAAGGCAGAAGATTTGTGTTGGCATTGCTAGAGGTTTGTCATACCTACATGAAGAATCAAGACTGAAGGTTGTTCATAGGGACATCAAGGCCACTAATGTGTTGCTCGATACGGATCTAGTTCCAAAGATTTCTGATTTTGGTTTGGCCAAGCTGGACGAGGAGGACAAGACTCACATTAGCACTAAAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGCTTTGGAATTGTTGCCTTTGAAATCGTTAGTGGAAGGAGCAACACTCTTTATCGGTCAAAGGTGGAAGCATTCTATCTTCTTGATTGGGCACATATGTTGAAAGAGAAAGGTGACCTAATGGAGCTAGTTGACAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAGCCATGGTGATGATCGACGTGGCTCTCCTATGCACCAATGTCACTTCAAACCTTAGGCCCTCTATGTCATCAGTGGTAAGTATGCTGGAAGGAACGACAGTGGTTCCAGAATTTGTTTCGGATTCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGCAATGAGGCAGTATTACTATCAGATGGATGAAAATAAGACAAGTAAGTCACAAACACAAAGTCAGAGTTTATTAAGTGATGGGGCATGGACTGCTACATCTTCATCAGGTGCAGACCTTTATCCTGTCAAAAGTGATTCTTCCTATTGGGAGAAAAGAAATTAA 3012 0.3911 MNIFSQFLFLLLIAIWFISLTATTIHPDEKKALKDIAKSLGKKDWNFDIDPCSNKPNWATPPVPQVSDNNVTCDCSVAGDNFCHVISISLISQNLIGILPPELTRLHYLQVIDLSLNYLNGSIPKEWGSMMYLTKISLVGNRLTGSIPVEVANISTLQILELWINQMSGNIPPELGNLSQLQILRLTSNNFTGELPMTLAKLTNLQDFRIEGNQFSGKIPDYIQNWTHIQNLMIQGSGLSGPIPSGISLLRNLTDLRISDLDGSEDAPLPQLDKLTSLRTLILRNCNISGKLHDYLGTMTSLKTLDLSFNKLSGTIPSTYAAMKSSNYIFLTGNLLTGPMLPWRTYVAVDLSYNNFSISQGSQLCNDEQVNLFSTTWGRNNIATDSCLSFECPKPSYSLYVNCGGKQATVNRKSYYGDSDLPGPARFYHSPKGNWAFSTTGVFMESSLLGENYSPKNITKLTMVDTELYMNARVSPISLTYYGFCLANGSYTVNLHFAEIMFTDDQTYRSLGRRVFDIYLQGKRVQKDFNIAEEAGGVGKKVIKPFKDIVVTSNTLEIRLYWAGKGTMAIPNKSAYGPLISAISVESDSPPGSISVGAVLGIVVAVILIIILVFGILWWKGCFRKKNSLARDLKSLDLQTGLFTLRQIKAATNNFHISNKIGEGGFGPVYKGCLSNGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPYLVKLHGCCVERDQLLLIYEYLENNSLARALFGPEEHQIKLDWSTRQKICVGIARGLSYLHEESRLKVVHRDIKATNVLLDTDLVPKISDFGLAKLDEEDKTHISTKIAGTYGYMAPEYAMHGYLTDKADVYSFGIVAFEIVSGRSNTLYRSKVEAFYLLDWAHMLKEKGDLMELVDRRLGSDFNKKEAMVMIDVALLCTNVTSNLRPSMSSVVSMLEGTTVVPEFVSDSSEVMDEKKLEAMRQYYYQMDENKTSKSQTQSQSLLSDGAWTATSSSGADLYPVKSDSSYWEKRN 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04186 1003 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 73 969 - -
Tsu02g04186 1003 CDD STKc_IRAK 661 928 - -
Tsu02g04186 1003 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 969 - -
Tsu02g04186 1003 SMART serkin_6 655 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04186 1003 ProSiteProfiles Protein kinase domain profile. 655 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04186 1003 SUPERFAMILY Protein kinase-like (PK-like) 638 938 IPR011009 -
Tsu02g04186 1003 Pfam Malectin domain 398 583 IPR021720 -
Tsu02g04186 1003 Pfam Protein tyrosine and serine/threonine kinase 656 926 IPR001245 GO:0004672|GO:0006468
Tsu02g04186 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Tsu02g04186 1003 MobiDBLite consensus disorder prediction 961 991 - -
Tsu02g04186 1003 MobiDBLite consensus disorder prediction 961 1003 - -
Tsu02g04186 1003 SUPERFAMILY L domain-like 62 338 - -
Tsu02g04186 1003 Gene3D Phosphorylase Kinase; domain 1 621 730 - -
Tsu02g04186 1003 Gene3D - 396 588 - -
Tsu02g04186 1003 Gene3D Ribonuclease Inhibitor 196 265 IPR032675 -
Tsu02g04186 1003 Gene3D Ribonuclease Inhibitor 266 371 IPR032675 -
Tsu02g04186 1003 Gene3D Ribonuclease Inhibitor 28 195 IPR032675 -
Tsu02g04186 1003 Gene3D Transferase(Phosphotransferase) domain 1 731 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04186 Tsu-Chr2 49366861 49375413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04186 21 978 Receptor kinase-like Gene Family AT1G53420 53.767 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g04186 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04186 - - gmx:732563 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04186 02 49366861 49375413 Tsu02g04186 02 49366861 49375413 ECH