Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04184 ATGAGCACTTCTTCCCAATTTCACATCCTTTCACTCATTGCCATTTTGTTCGTATCTCTAACAGCTTTTGCTGCTACTACTATTCACCCAGATGAAAAGAAAGCTCTTGAAGATATAGGTAACTCACTTGGTAAGAAGGATTGGAACTTCGATACAGATCCTTGCAGTAACAAACCAAACTGGATTACAAAGTTAGAGAACAATGTCACATGTAACTGTTCTGTAGCTGGTGATAACTTCTGCCATGTTGTTGCAATAACTTTGAAAGAGCAAAATCTTCCCGGCACTCTACCACCGGAACTGAACAGGTTGCCTTACCTTCAAATTATTGACCTCTCTCGCAATTACTTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGACGAATCTTCTTAACATTACTCTCTCTAGCAATCGATTAACTGGTTCAATACCGGCGGAGATTGCAAATATATCTACTCTGATACAGCTGGACTTAACGGCCAATCAAATGTCTGGAAATATTCCACCTGAGCTTGGGAGTCTAACTCAGATTCGAACACTGCAACTTTCCTCTAACAATTTTACTAGACAACTACCTGCAACGTTGGCCAAGCTCACTTCATTGCAAGATTTCCGAATTGCGGACAACCAGTTGTCTGGAAAGATACCTGGTTTTATTCAAAACTGGATAAATATCAATACATTAGTCATTCAAGGGAGTGGATTAAGTGGGCCAGTTCCTTCTGAAATTTCACTTTTGAGAAACTTGGTTGAATTGAGAATTAGTGATTTGAATGGATCCGAATATGCACCTTTGCCGCAACTTCAAAATATGACATTGTTAAACAGACTGATTCTGAGGAATTGCAACATCAATGGAAAACTACCTGAATATATTGTGAAAATGACAACATTAAAACACATAGACCTCAGCTTTAACAGATTAAGTGGAATAATTCCAAGAACCTATGCTGACATGAGCAATGCGAATTACATATTTTTAACTGGAAACCTTCTCACTGGACCAGTGCCTCCTGTTTGGGGAAAGAATTCCGACGTAGATCTTTCATACAATAACTTCAGCATTAGCCAAGGGAGTCAGATATGTCAAGGCGGAAAAGTGAACTTGTTTTCTACTTCATCGGCACACAATGACATAGGAGATTTGTGTTTTGAATGTCGCAAACACTCATACTCCCTTCATATAAATTGTGGTGGAAATCAAGTAACAGTCAACAGAACAAGTTATGTTGGTGATTCAGATTCATCTGGACCAGCTAGATTCGACATCAGTCCAACAGGAAGTTGGGCATTTAGCAGCACTGGTCAATTCGTTGATAGTGATCTACTTGGAAAAACGTTTTCCCCGCAAAGTATCTCTAAACTTACTATGGTGGATTCTGAATTGTACACGAATGCACGTGTTTCTCCTATTTCTTTGACTTATTATGGGTTTTGCCTCGCAAATGGAAGCTATACCGTAAATCTACATTTTGCGGAAATAATGTTCACAGACGATCAAACTTATAGTAGTCTTGGAAGGCGTGTATTTGATATCTATCTTCAGGGAAAGCAGGTGCAAAAGGACTTCAATATTGCAGAAGAAGCGGGAGGAGTTGGTAAAAAGGTCGTAAAATTATTCAAAGATGTTGCTGTTACTAGTAATACTTTGGAGATCCGCTTATATTGGGCTGGAAAAGGGACAGAGTATCTCCCAAATAAATCAGTATATGGTCCTCTTATATCAGCTATATCAGTGGAATCTGATTCTGCACCTGGAGGCATATCTACAGAAGTTTTTGCTGGAATTGTGGTTGCAGCAACAGTTACTATCATTCTATTATTTGGTATACTTTGGTGGAAAGGatgttttgaaaagaaaaactcattggcaagagAGCTGAAGAATTTAGACCTTCAAACGGGTTTATTTACTTTAAGACAAATCAGAGCAGCAACAAACAACTTTGATATTTCAAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTGTACAAGGGATGTTTAACCAATGGGACATTGATAGCAGTCAAACAACTTTCATCTAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACACCCTTATCTTGTTAAACTTCATGGTTGTTGTGTGGAGGGAGATCAATTGTTGCTCATATATGAATACCTGGAAAACAATAGTCTTGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCAACAAGGAAGAAGATCTGTGTCGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGGTTGTTCATAGGGACATTAAAGCCACTAATGTGTTACTTGATACAGATCTCAACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGACGAGGAGGACAATACTCACATTAGTACCAGAATTGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAGATCGTTAGTGGAAGGAGCAACACCATGTATCGGGCAATGGAGGAAGCATTCTATCTTCTTGATTGGGCACATTTATTGAAAGAGAGAGGTGACCTAATGGAGCTAGTTGATAGAAGATTAGGTTCAGATTTCAACAAAAAGGAAATTATGGCGATGATCAACGTTGCTCTCCTGTGCACCAATGCCACTTCAAACCTTAGGCCGTCTATGTCGTCAGTGGTATGTATGCTTGAATTAAGGACTGAGGTTCCAGAATTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGATGGAATCAATGAGGCAGCATTGCTATCAGATGGAAGAAAATAAGGTAAGTAAGTCACAAACACAAAGTGAGAGTTTATCAAATGATGGACCATGGACAGCTACATCTTCATCAGCTTTAGACCTTTATCCTGTTCACCTTGATTCTTCCTATTGGGAGAAAagatattga 3000 0.3857 MSTSSQFHILSLIAILFVSLTAFAATTIHPDEKKALEDIGNSLGKKDWNFDTDPCSNKPNWITKLENNVTCNCSVAGDNFCHVVAITLKEQNLPGTLPPELNRLPYLQIIDLSRNYLNGTIPKEWGSMTNLLNITLSSNRLTGSIPAEIANISTLIQLDLTANQMSGNIPPELGSLTQIRTLQLSSNNFTRQLPATLAKLTSLQDFRIADNQLSGKIPGFIQNWININTLVIQGSGLSGPVPSEISLLRNLVELRISDLNGSEYAPLPQLQNMTLLNRLILRNCNINGKLPEYIVKMTTLKHIDLSFNRLSGIIPRTYADMSNANYIFLTGNLLTGPVPPVWGKNSDVDLSYNNFSISQGSQICQGGKVNLFSTSSAHNDIGDLCFECRKHSYSLHINCGGNQVTVNRTSYVGDSDSSGPARFDISPTGSWAFSSTGQFVDSDLLGKTFSPQSISKLTMVDSELYTNARVSPISLTYYGFCLANGSYTVNLHFAEIMFTDDQTYSSLGRRVFDIYLQGKQVQKDFNIAEEAGGVGKKVVKLFKDVAVTSNTLEIRLYWAGKGTEYLPNKSVYGPLISAISVESDSAPGGISTEVFAGIVVAATVTIILLFGILWWKGCFEKKNSLARELKNLDLQTGLFTLRQIRAATNNFDISNKIGEGGFGPVYKGCLTNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLHGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIKLDWSTRKKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDTDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTMYRAMEEAFYLLDWAHLLKERGDLMELVDRRLGSDFNKKEIMAMINVALLCTNATSNLRPSMSSVVCMLELRTEVPEFVSDSSEVMDEKKMESMRQHCYQMEENKVSKSQTQSESLSNDGPWTATSSSALDLYPVHLDSSYWEKRY 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04184 999 MobiDBLite consensus disorder prediction 956 974 - -
Tsu02g04184 999 Pfam Protein tyrosine and serine/threonine kinase 653 920 IPR001245 GO:0004672|GO:0006468
Tsu02g04184 999 MobiDBLite consensus disorder prediction 955 974 - -
Tsu02g04184 999 CDD STKc_IRAK 657 923 - -
Tsu02g04184 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Tsu02g04184 999 Gene3D - 390 585 - -
Tsu02g04184 999 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Tsu02g04184 999 Pfam Malectin domain 394 579 IPR021720 -
Tsu02g04184 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 71 287 - -
Tsu02g04184 999 Gene3D Transferase(Phosphotransferase) domain 1 727 935 - -
Tsu02g04184 999 SUPERFAMILY L domain-like 78 355 - -
Tsu02g04184 999 SMART serkin_6 651 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04184 999 Gene3D Ribonuclease Inhibitor 264 381 IPR032675 -
Tsu02g04184 999 Gene3D Ribonuclease Inhibitor 194 263 IPR032675 -
Tsu02g04184 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 287 356 - -
Tsu02g04184 999 Gene3D Phosphorylase Kinase; domain 1 617 726 - -
Tsu02g04184 999 ProSiteProfiles Protein kinase domain profile. 651 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04184 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 71 287 - -
Tsu02g04184 999 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 377 967 - -
Tsu02g04184 999 SUPERFAMILY Protein kinase-like (PK-like) 634 928 IPR011009 -
Tsu02g04184 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 287 356 - -
Tsu02g04184 999 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 377 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04184 Tsu-Chr2 49341049 49348332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04184 20 964 Receptor kinase-like Gene Family AT1G53420 53.766 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g04184 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04184 - - gmx:732563 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04184 02 49341049 49348332 Tsu02g04184 02 49341049 49348332 ECH