Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04173 ATGTATTTTGCAACCACAATGCTCTTCCTCCTATTAACATACATAGCTATAAACTTTTTTCCACTCAAAAATAGAgccaaaaaacaaaactataatCTTCCACCAGGACCTTCAAATTTTTcaatcatgttaaatatttttgaattagGAAAAAAACCACAATATTCATTAGCAAAATTATCCAACTTGCATGGTCCAATAATGCATTTAAAATTAGGACAAATATCAACTATAGTAATTTCTTCAGCTGAAATAGCACAAGAAGTGCTTCAAACATATGATCACTTATTCTCAAATAGAACAATTACTCAAGCTGTTTCAGTTCTTAATCATGCTCATTTTAGTTTACCCTTTATGCCAGTTTGTGATTATTGGAGAGatttaagaaaaatatgcaaaaataatttattttctaacaaAACTCTTGATGCTAGCCATGCACTTAGGTGTAAAAAGCTAGAAGAGCTTTTGTTTGATATAGAAAAAAGTAGCTTAATTGGTGAAGCCGTTGATGTTGGAAGATCTATTTTTATGActtcattaaattttttgtcaaactcaTTTTTCTCTATGGATTTTGTTAACTCTTCAGGTGAAACTGATGAATATAAAGGTATTGTTGAAAATCTTGTGAGAGCAATAGGAACACCAaatattgttgatttttttccagttttgaaaatggttgatCCACAAGGTATAAGTGGAATTTCAGCTACTTATCTTGAAAAGTTGTTGGATATTATTGGTTCATATATTACCAAAAGATTGGAGTTGAGGAATGGAGAAAATTATGTCTCTCATGATGACATGTTAGACAATTTGCTCAACATCTCTCAAGAGAATGACCAAAAGATGGACAACACAAAGATTAAACATTTGTTTCTTGATTTATTTGTTGCTGGAACTGATACAACTTCCTACACAATCGAGAGAGCAATGGCCGAGCTAATCTACAACCCACGTGTAATGTCAAAAGCAAAAGAAGAACTCGAGCAAATAATTGGCATAGGAAATACAGTTCAAGAATCAGATGTTACTAGACTTCCATATTTACAAGCAATTGTAAAAGAAACATTACGTTTGCACCCATCAGCTCCACTTTTACTACCAAGAAAAGCTAAGATAGATGTAATCCTTCAAGGATACATTATTCCAAAAGGTGCACAAGTCTTAATTAACAAATGGGCGATGGGAAGAAACCCAAAAATTTGGGATAATCCAACTTCGTTTTCGCCGGAAAGATTTTTGGGATCTGAAATTAATTTCAAGGGTCATAATTTTCAATTGACACCATTTGGTAGCGGAAGAAGAATATGTCCTGGCATGCCACTTGCTATTAAAATGTTGCATACTATGTTGGGATCATTGATTAATTTCTTTGATTGGAAACTCGAAAATGAAGACAGAGATATTAATCAACGTTTGAGAGCTATTCCCGTTAGAGTAAACAAGGTGTAA 1461 0.3053 MYFATTMLFLLLTYIAINFFPLKNRAKKQNYNLPPGPSNFSIMLNIFELGKKPQYSLAKLSNLHGPIMHLKLGQISTIVISSAEIAQEVLQTYDHLFSNRTITQAVSVLNHAHFSLPFMPVCDYWRDLRKICKNNLFSNKTLDASHALRCKKLEELLFDIEKSSLIGEAVDVGRSIFMTSLNFLSNSFFSMDFVNSSGETDEYKGIVENLVRAIGTPNIVDFFPVLKMVDPQGISGISATYLEKLLDIIGSYITKRLELRNGENYVSHDDMLDNLLNISQENDQKMDNTKIKHLFLDLFVAGTDTTSYTIERAMAELIYNPRVMSKAKEELEQIIGIGNTVQESDVTRLPYLQAIVKETLRLHPSAPLLLPRKAKIDVILQGYIIPKGAQVLINKWAMGRNPKIWDNPTSFSPERFLGSEINFKGHNFQLTPFGSGRRICPGMPLAIKMLHTMLGSLINFFDWKLENEDRDINQRLRAIPVRVNKV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04173 486 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 Pfam Cytochrome P450 34 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 SUPERFAMILY Cytochrome P450 34 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 5 469 - -
Tsu02g04173 486 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 469 - -
Tsu02g04173 486 Gene3D Cytochrome P450 25 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g04173 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04173 Tsu-Chr2 49130227 49132408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04173 8 482 Cytochrome P450 AT2G45550 42.169 4.63e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04173 - - gmx:100792017 613.994