Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04158 ATGACAGCTGCTAATGAAGTCATTCCAAATTCAGATGATTCAACTCCTAAGAGCAAGAAAAACCATCAACCAGGATGGAACACTGCACAAAATTTGGTTTTAATTAGTGCTTGGATTAAATTTGGAACAAGCAGTATTGTCGGGAGAAGCCAGAAAGGCGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCACTGTTCATTCGATCCTCCGCGTGATGGAATTTCATGCCGAAACCGTTTTAATTACATGAACAAAATACTGAATAAATGGATTGACGCTTATGATGGAGCTAAGCGTATGCAAGCAAGCGGTTGGTCGGAGAATGGATCTAGTGCTCGTCCTATAGGTAGGGATGCAAccaaaaaaaagggtaaaaagAAATCTGCCATGGAGATGGTGGACAAAGACTTTGAATCGTTCAGAGAAATTAAGTTGCAAGAGATAGAACAAGTGACAAAGCGTCGAAAGAAAATATTGGAAGATAGTGCACCTCGCACTAGAAAATATCTAAATAGAGATCATGCAGCGGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATACGACGATGCAATGTTTCGTCGTCGGTACCGCATGGAAAAACATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCAACCAACAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAACAATGCGAATGTTAGCATATGGTGTGTCAGCAGATGCAGTTGATGAGtacatcaaaataggaggtaGTACAACACTGCAGTGCTTACATAGATTCTGTAAAGGAATCATACGATTGTATGAGCAAGTATATCTGAGAGCACCAACCCAAGATGACCTGCAAAGAATACTACATGGAAAGACTCCAAGTGTGAATTTCTACGTGAATCAACGTCCCTATGATATGACATACTATCTAGCTGATGGTATTTACCCTTCTTATCAAACTTTCGTCAAATCAATTAGACTTCCTCAAAGTGAACCCGATAAGTTATTTGCTCAACATCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTTCAAGCTCGATTTAAAATCATCTGTGAACCAGCTCGCTTGTGGGACATAAACGATTTGAGTATCATCATGAGATCATGCATCATATTGcataatatgattgttgaggATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGAGGAAAGTGGATCTAGTGCACCGCAATCATACTCGACCGAGGTGTTACCCGCTTTTGCAAGTCATGTGTGTGCTAGATCCGAGTTCCGTGATCCAAAAGGTCATCAAGAATTGCAAGCAGATCTAGTGAAGCACATATGA 1398 0.3956 MTAANEVIPNSDDSTPKSKKNHQPGWNTAQNLVLISAWIKFGTSSIVGRSQKGETYWGKIAEYCNEHCSFDPPRDGISCRNRFNYMNKILNKWIDAYDGAKRMQASGWSENGSSARPIGRDATKKKGKKKSAMEMVDKDFESFREIKLQEIEQVTKRRKKILEDSAPRTRKYLNRDHAAANQRLIDDYFANEPTYDDAMFRRRYRMEKHVFLRIVGDLSSSDNYFTQRVDATNKEGISPLAKCTTTMRMLAYGVSADAVDEYIKIGGSTTLQCLHRFCKGIIRLYEQVYLRAPTQDDLQRILHGKTPSVNFYVNQRPYDMTYYLADGIYPSYQTFVKSIRLPQSEPDKLFAQHQEGCRKDIERAFGVLQARFKIICEPARLWDINDLSIIMRSCIILHNMIVEDERDSYSQRWTDFEQSEESGSSAPQSYSTEVLPAFASHVCARSEFRDPKGHQELQADLVKHI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04158 465 MobiDBLite consensus disorder prediction 1 25 - -
Tsu02g04158 465 Pfam Plant transposon protein 299 408 IPR006912 -
Tsu02g04158 465 PANTHER OS06G0597250 PROTEIN 141 303 - -
Tsu02g04158 465 PANTHER UNCHARACTERIZED 302 465 IPR045249 -
Tsu02g04158 465 PANTHER OS06G0597250 PROTEIN 302 465 - -
Tsu02g04158 465 MobiDBLite consensus disorder prediction 106 129 - -
Tsu02g04158 465 PANTHER UNCHARACTERIZED 141 303 IPR045249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04158 Tsu-Chr2 48800094 48802579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04158 26 111 Glutathione S-transferase Gene Family AT5G41240 30.000 1.30e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04158 - - aof:109847733 647.891