Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04146 ATGCAGAAAGATCAACTCAAGAAGGATATTAAAGAGGTAAAATTTTTCACCGAGTATGGAGACGCCAACAGATACAAGATTCTCGAAGTTATTGGGAAGGGTAGCTACGGAGTTGTATGTGCAGCAATTGATACACACACTGGGGGAAAAGTTGCGATCAAGAAGATTCATGATGTTTTTGAGCATATCTCTGATGCCATTAGAATCCTCAGGGAAGTCAAGTTACTAAGACTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATTATGTTGCCACCTtcaaaaagagaatttaaagataTTTATGTTGTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACTCGCGAACACCAACAGTTTTTCCTTTATCAGATGCTTCGTGCATTGAAGTTTATGCATTCAGCAAATGTATATCACAGAGATCTTAAGCCGAAGAATATACTGGCGAATGCAAATTGCAAACTCAAAGTCTGTGATTTTGGACTGGCTAGAGTTGCATTCAATGATACCCCAACAACAACTTTTTGGACGGATTATGTTGCTACCAGATGGTATAGAGCCCCCGAACTATGCGGCTCTTTCTTTGCTAAGTACACACCGGCAATTGATATATGGAGCATTGGATGCATTTTTGCAGAAGTGCTGACAGGAAAACCATTGTTTCCTGGTAAAAGCGTAGTGCATCAATTAGATTTGATTACCGATCTTCTTGGAACACCACCACCCGAAATTACCTCAGGAgtTCGAAATGAGAAGGCAAGGAAATACTTGATGGAGATGCGGAAGAAACTTCCTGTGCCATTTGAACGGAAATTTCCAAATGCTGATCCATTGGCACTTCGTCTATTGCAAAGACTTCTAGCATTTGATCCAAAGGATCGACCGACAGCTCAAGAGGCGCTTGCTGATCCTTTCTTCAAGGGTTTGGCCAAAATTGAAAGAGAACCTTCTTCTcagccaatttcaaaaatggAGTTTGAGTTCGAGAGGAGGAGGTTGACAAAAGATGATATTAAGGAACTAATATATCGGGAAATACTGGAATATCATCCTCAACTGCTTAAAGATTACATAAATGGAACTGAAGGCACAAACTTCATGTATCCTAGTGCGATAGACCAATTCAGAAAGCAATTTGCATATCTTGAAGAGAATAAAGGTAATTCTGGCCCAGTGATTCCTCCAGAAAGAAAGCATGTGTCCCTTCCAAGgtCCACTGTTCTCTCTAGCACAATTCCTCCGAGTATGCAACCATCTTTTCCTCCATATGCAAACAAGCAAATCACACAAGAGGCATTCAAGATTTCTAGAGCAGCTGAATCAAATTCTTTAAGTCAATCAAAGGGTTCACGACCTCCCCCAAGAGCGCCAGCAGCCAAACCAGGTAGAGTTACAGGGCCAGTTCTCTATGACAATGGGAGAAGCACAAAAGATAATTATGATGCAAGGATCTTCAGCCAAAAGACTACTATTCCTCAAACAATCTCACCACACTGTTTCCAAAGGGTTGCACGCACACACCAAACTAATGCAAAAACTACACCAGAAACATACAAGGATAATTCACAAGGCAAACATCAACTCTCACCGCAGAAGTGTAACGTGCCTGCCAGACCAGCTATCGATCTTAATACCAATCCGTACCACCATAAGGGCAAGAATGATCTGTTAAATGATCCTGTCACTGTTATTGATGCGAAATTGTTGCAGGCACAATCTCAATTTGGTGCAGCTGGTGCTGCAGCAGTAGCTGTTGCTGCTCACAGGCATTCTGGCGGCCTCCAGTGCGGCCTTCAGTGTGGTCTTCAGTGCGGATTGTCATAG 1854 0.4132 MQKDQLKKDIKEVKFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGGKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHQQFFLYQMLRALKFMHSANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDTPTTTFWTDYVATRWYRAPELCGSFFAKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPPPEITSGVRNEKARKYLMEMRKKLPVPFERKFPNADPLALRLLQRLLAFDPKDRPTAQEALADPFFKGLAKIEREPSSQPISKMEFEFERRRLTKDDIKELIYREILEYHPQLLKDYINGTEGTNFMYPSAIDQFRKQFAYLEENKGNSGPVIPPERKHVSLPRSTVLSSTIPPSMQPSFPPYANKQITQEAFKISRAAESNSLSQSKGSRPPPRAPAAKPGRVTGPVLYDNGRSTKDNYDARIFSQKTTIPQTISPHCFQRVARTHQTNAKTTPETYKDNSQGKHQLSPQKCNVPARPAIDLNTNPYHHKGKNDLLNDPVTVIDAKLLQAQSQFGAAGAAAVAVAAHRHSGGLQCGLQCGLQCGLS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04146 617 MobiDBLite consensus disorder prediction 448 485 - -
Tsu02g04146 617 MobiDBLite consensus disorder prediction 519 543 - -
Tsu02g04146 617 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Tsu02g04146 617 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04146 617 MobiDBLite consensus disorder prediction 519 540 - -
Tsu02g04146 617 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 482 - -
Tsu02g04146 617 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Tsu02g04146 617 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04146 617 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu02g04146 617 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Tsu02g04146 617 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Tsu02g04146 617 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g04146 617 CDD STKc_TDY_MAPK 24 361 - -
Tsu02g04146 617 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04146 Tsu-Chr2 48636373 48641324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04146 1 604 MAP Kinase Gene Family AT1G53510 70.874 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu02g04146 Pkinase 6.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04146 - K04371 gmx:100800878 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04146 02 48636373 48641324 Tsu02g04146 02 48636373 48641324 ECH