Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04140 ATGGCAGAAGAAATCACCGAATCAAGCGAATCAAGAAAACAAGCAAGGCTAGCAATTCTAGAGCTAGCAAACATGATAAGTGTACCTATGTCATTAAACGCCGTCGTACGTCTCAATGTTGCTGACGCAATTTGGGAAGGTGGTTCTAACGCGCCTCTCACAGCTTCTCAGATCCTCGCGCGTGTAATTCCTGACGGTAGCGGTGATGCCGAGAATCTTCAGCGTGTGCTTCGGATGTTAGCTAGTTATGGAGTTTTTGAAGAAGATATTGGTGGTGGTGAAAGGAAATACTCGTTAACTGATGTTGGCAAAACGCTTGTGACTGATGAATATGGGTTGTCGTATGGTGCTTATGTGCTCCAGCACCATCAGGATGCATTGATGAGAGCATGGCCATTGGTCCATGAAGCAGTTGTGGACCCTTCAAAGGAGCCATTTGAGAGAGCTAATGGAGAAGGAGCTTATGATTATTACTTGAAAAAATCAGAGATGAATGAGTTAATGTTGAAGGCTATGTCAGGGGTATCAGTGCCCTTCATGAAAGCCCTTTTGGAGAGCTATAATGGCTTTCAAAATGTTGAGAAGTTAGTTGATGTTGGTGGTAGTGGTGGTGATTGTCTCAAAATGATCTTGCAGAAATTCCCAAATATTAAAGAAGGGTTAAACTTTGATCTTCCTGAAGTTGTGGCCAAAGCACCACAAATTCCAGgtGTAACTCATGTGGGTGGTGACATGTTCAAATTCATTCCCCAAGCAGATGCTATCTTCATGAAGTGGGTGCTAGTAACATGGACAGACAAAGAAATCAAGCACATAATGCAAAACTGTTACAAGGCACTCCCAGCAGGTGGAAAACTAATTGCTTGTGAGCCAGTGTTGCCAGAAGATTCAGATGATAGTCACAGAACAAGGGCATTGCTTGAAGGTGACATATTTGTGATGACCATTTACAGAGCCAAAGGAAAACATAGGACTGAAGAACAATTTAAGCAGCTTGGAATTTCTGCAGGTTTTAATCTTTTCAAATCCTTTCATGTTGACTATTTCTACACTGTTTTGGAGTTTCAGAAATGA 1074 0.4199 MAEEITESSESRKQARLAILELANMISVPMSLNAVVRLNVADAIWEGGSNAPLTASQILARVIPDGSGDAENLQRVLRMLASYGVFEEDIGGGERKYSLTDVGKTLVTDEYGLSYGAYVLQHHQDALMRAWPLVHEAVVDPSKEPFERANGEGAYDYYLKKSEMNELMLKAMSGVSVPFMKALLESYNGFQNVEKLVDVGGSGGDCLKMILQKFPNIKEGLNFDLPEVVAKAPQIPGVTHVGGDMFKFIPQADAIFMKWVLVTWTDKEIKHIMQNCYKALPAGGKLIACEPVLPEDSDDSHRTRALLEGDIFVMTIYRAKGKHRTEEQFKQLGISAGFNLFKSFHVDYFYTVLEFQK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04140 357 Pfam O-methyltransferase domain 135 339 IPR001077 GO:0008171
Tsu02g04140 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Tsu02g04140 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 355 IPR029063 -
Tsu02g04140 357 PANTHER O-METHYLTRANSFERASE 1 356 IPR016461 GO:0008168
Tsu02g04140 357 PANTHER OS02G0823400 PROTEIN 1 356 - -
Tsu02g04140 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Tsu02g04140 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 109 IPR036390 -
Tsu02g04140 357 Gene3D - 2 111 IPR036388 -
Tsu02g04140 357 Gene3D Vaccinia Virus protein VP39 112 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04140 Tsu-Chr2 48559468 48565429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04140 7 357 Monolignol Biosynthesis Gene Families AT3G53140 74.157 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04140 - - gmx:100784957 601.668