Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04091 ATGGATGTTATTATTTCAGTGGCTGCTAAAATTGCTGAATTTATGGTTGCGCCTATTGGACGCGAATTTGGTTACATATTCTACTACAAGGGAAACCTTAAAAGGATGAAAACTGATGTTCAAAAATTGGAGGGCATGAAAGACAGTGTGCAACACACTATTGATGAGGCTAAAAGGAATGGAGAAGAGATTGAAAATATTGTCCAGAATTGGCTGAACAAAGTTGACAACACTGTTGCTGAGGCAAAGAAACTTGCTGACACTGAAGACCATATAAAAGCTCTATGTTCTATGGGACACTTTCCCAATTTGTGCACAAGACAACAGCTGAGCAAGAAAATCAAAAAGATGATACAAGAGATTTCTAATGTCCTAGCAGAAAGAAAATTTTGTAGAATTTCTTACCGTGCTGCTTCTAAGGTCACCGTTACACCGTTCGGTAGAGGTTATGAGGCCCTGAACTCCAGAACATCAATGCTGAATGAGATTATGATGGAATTGAAGAATCCCAACATCTTCATTATTGGGGTTTATGGAATGGGAGGAGTGGGCAAGACAACACTAGTGAAAGAGTTAGCTTGGCAAACAGAGAAAGACGTGTCATTTGGAGCTGTAGTTATGGCTACTAATATAACTGGTTCTCCAAATGTGAAAAATATTCAAGGTCAAATTGCGGATGCTTTGGATCTGAAATTTAATAAGAAGACAAAAGAAGGAAGAGCAATGCAATTACGTGAAAGAATAAGCAAGGAGAAGAGTATTCTTGTTATTTTGGATGATATCTGGGGTAGACTTGATTTGGAAGAAGTGGGGATTCCTTTTGGTAATGATCACAAAGGATGCAAGTTGGTGGTGACATCCAGAGATCTCAATGTGTTGAGCCGTGAAATGGGCACTCAAAAAGAATTTAGACTTGAAGTTTTACTTGGGGAGGATAGTTGGaaattatttgagaaaatggCAGGTGATGTTGTTCAAGATTTCAATATAAAACCAATTGCTATAGAAGTGGCTAGACGTTGTGCTGGATTACCCCTTTTGATTGTTACTGTGGCAAAGgctttgagaaaaaaaagtttctttgATTGGAAATGTACATTAAATGAGTTAGAGAGTTTTGATCAAGAAGGGCTGCATAAGAAAATCTACTCTGCCTTGGAATTTAGTTATAGTTGCCTAGAAAGTGATGAACTAAAGTCATTGTTTTTATTCATCGGCTCATTTGGACTAGATTACATCCATACTGGAGGACTGTTTTTATGTTATTGGGGGTTGGGCTTATTTAGACACTCTCACACATTGACAATTGCAAGAACCAGATActacaaattaattaatgaccTCAAGGCCTCTTCATTGTTACTCGAGTCTGAACCTGAACGCGTTAGAATTCATGATGTTGTTAGAGATGTGGCTAAATCAATTGCATCTACAACTCAACCAACCTATAGCGTGCCAAGGTACACTTTGATAAAACAATTTCCAGATATGGATCAGCTTCGAAAATGCCATCAGATCATCGTATCTTGGTCTTATATTTACAAGCTTCCTGAGAAGCTGGATTGCCCAGAGTTGAAGCTACTTCTGCTTCAGAATGTAGGCGATTATTTGAAAGTTCCTGATGACTTCTTCTCCGGGATGAGAGAGCTAAAGGTTATTCTGTTATATGGAATGATGTTTACCCCTTCTCCACCAACATCTCTTTGTCTCTTGACAAAAATCCAAACATTGGTTCTTTCTGGATGTGTCTTAGAAGACATATCAATAGTTGCAGAGCTGAAAAGTTTAGAGATTCTTAGGCTTGAAAGATCTGATATTAAAGAGCTCCCAAAAGAAATTGGACAACTAACTAATCTTCGAATGCTGAATTTAACCAACTGCTCTGGACTGATATTCATTCCTGCAAATCTTATTTCAAGCTTAACTTCCTTGGAAGAGTTGTACTTGGGGAATTGCTTTATCCAATGGCATGTAAAGGGAAGCAAAGATCATATCAACAATGCAAGTCTAGAAGAGCTAAGGAATTTGTCTCATCTAACTGCTTTAGACATAATGATTCAAGATGCTTCAGATTGGCCAAGGGACTTACAGGTCTTCGAACAGCTTGAAAGTTACAACATATTTGTTGGTGATATATGGAAATGGTCATTGGTATGGTCTGTAGGGGATTACCAATCTTCAAGAATACTTAAGCTCGTAGACAGTAGGTGCTCAAGCATTCTTTTGGATCGTGGGTTTAACTTCTTGTTGAAATCAGCTAAGGACATGTGCCTTGCAAAAATATGTGTTAGAAATGTCCTTCATGAACTGAATAGGGAAGGTTTTCCGCAATTGAAGAATTTGTGCATTCAAGACAGTACTGAGCTGCAGTACATTGTTAACTCAACGGGGTTGGTTCATCCTTATCCTGCTTTACCCAACTTAGAGACTCTGTCCCTTCAAAATCTGTTTAATCTGGAAGAAATATGTCATGGGCCAATTACAATTCAATCTTTTACCAAACTAAAATCTTTTGAAGTCAAAGGTTGTGATAAGTTGAAGAATCTGTTATGGTACTCCCTCGTTAGAAACCTTCCTCAACTTCTCGAAATAAAAGTTTCTGATTGCAAAATGATTACAGAAATCATAGCTGAGCCAACATCTGAGGCTGATAAAGAGATTGACAAGATTATGTTCCCCAAGTTGCGTTCCCTTGAACTTGAGAATTTGCCTAGTCTCATTAGTTTTTGTTCCATGCCATTGAAAGCTGATAAGTGTCTCAAAAAGTGTGGagagaatgatgatgatgataaacaGTGCATGCCCGTGGCACTAATTGTTCAAAAGgTTGAGATGCCTCGCCTTGAACTCTTGAAGCTGTCTAATATCAACTCTAGGAAGTTGTGGGATGACAACCTTCCGGGTCATTCTTTCGTTCAAAACTTGACGAGTTTGACAATTGACAAATGTGGTAGCATAGCGTATGCATTCTCGTCCTCAGTGGCTAGAGATCTTGTAAACTTGAAGTATCTTCAGATTAGTAATTGCCAAAAGCTGGAGGAGATATTTGTCTCGGATGGAAAGTTGGGCAATGTCTCCAACTCGGTTGTATTTCCAAACTTGGAGACATTGGAAATCTCCCACATGGAACACTTGAAGTCATTATGGCATAATCAACTAGCTCCAAATTCCTTCTGCAAACTGAAGCAGTTGAAAATTCAATCCTGCAATAAATTATCAATTGTATTTCCATCTTATGTGCTTGATAAATTACAGAATCTGGAGAAACTGACTGTAACTAATTGTCCTGCACTAGAAGTTCTATTTGAAACACAAAGTCTACAAGTAGAAGGTGGTAGACAAACAGGGCTGAAATATGAAAACTTCACGTTTCAAAATCTCTGCCAATTGGAACTTACTGGATGCAAAAGCCTTAAATATGTCTTCCCTTTCTATGTGGCTAAAGAGCTTCAGCATCTCCAAGTACTTTGCATAATAGAATGTGGTGTAGAAAGCATTGTAGCACGAGATGAAATAAATGACACAAGTCCAAATTCGATACTGATTTTCCCAGAATTGAAGTCTCTGAGTTTTCGGCAACTGACACAACTTCAAAACTTCTACCATGGATTGCATACCTTGGATTGTCCTGTTTTAAGAGATGTGGATGTGTTTCATTGTGATAAGTTCGTACTATTCGAGCCAATGACTCTAAACTACCAAGACAATGTCACAGTTGATATACTGCCTCTTCTCTCAATTGAAAAGGTTGTCTCCAACACAAGTAAGCTTATTCTGAATTGCAAGGATGTCACCATGTTATGCAATGGTCAACTTAATAATGAGCCTATCTACACAGTAAAAGATCTTAGCCTACGATGTTTTCATGATGTGTCTGACAAATTTCCATCTGGTTTTGTCCAAAGATTCATCAATCTTGAAAATCTTGAGGTGTCATGTAGTTCTTTCACAGAGGTTTTGTTGAGTGAAAGCTTTGGAATTGGACATTCTGAAACAACTATGAAGTTGAGAAGACTTAAACTTGATGGATTACCAAACCTCAAGTTTATTTGTAGAGAAAAATTTGAGAAAATACACATATATGGTTGTGAAATAATAGAAGAAATAGTTGCAAGTGATGATGAGAATGATACTTCTGAGCTAGCTTTTATGAAGTTGGAGACTCTGATGTTGAGTAACTTACCAAGGCTAAGAAGTTTTTGCAAAGGAAGACATGATTTTAAATTTCCACTACTGCGTTACTTAGTTGTAAAAGATTGTCCCATGATGGAAACTTTCTCACATGGAGTGTTGAATGTACCAAGACTCAGAAGAGTACGTGTAAATCAGCAAGAGCCGGATAAATGGCATTGGAATGGTGACCTTAACACTACTATAAGAAAATATGTAGCGAAAAATGAACTCTAA 4407 0.3717 MDVIISVAAKIAEFMVAPIGREFGYIFYYKGNLKRMKTDVQKLEGMKDSVQHTIDEAKRNGEEIENIVQNWLNKVDNTVAEAKKLADTEDHIKALCSMGHFPNLCTRQQLSKKIKKMIQEISNVLAERKFCRISYRAASKVTVTPFGRGYEALNSRTSMLNEIMMELKNPNIFIIGVYGMGGVGKTTLVKELAWQTEKDVSFGAVVMATNITGSPNVKNIQGQIADALDLKFNKKTKEGRAMQLRERISKEKSILVILDDIWGRLDLEEVGIPFGNDHKGCKLVVTSRDLNVLSREMGTQKEFRLEVLLGEDSWKLFEKMAGDVVQDFNIKPIAIEVARRCAGLPLLIVTVAKALRKKSFFDWKCTLNELESFDQEGLHKKIYSALEFSYSCLESDELKSLFLFIGSFGLDYIHTGGLFLCYWGLGLFRHSHTLTIARTRYYKLINDLKASSLLLESEPERVRIHDVVRDVAKSIASTTQPTYSVPRYTLIKQFPDMDQLRKCHQIIVSWSYIYKLPEKLDCPELKLLLLQNVGDYLKVPDDFFSGMRELKVILLYGMMFTPSPPTSLCLLTKIQTLVLSGCVLEDISIVAELKSLEILRLERSDIKELPKEIGQLTNLRMLNLTNCSGLIFIPANLISSLTSLEELYLGNCFIQWHVKGSKDHINNASLEELRNLSHLTALDIMIQDASDWPRDLQVFEQLESYNIFVGDIWKWSLVWSVGDYQSSRILKLVDSRCSSILLDRGFNFLLKSAKDMCLAKICVRNVLHELNREGFPQLKNLCIQDSTELQYIVNSTGLVHPYPALPNLETLSLQNLFNLEEICHGPITIQSFTKLKSFEVKGCDKLKNLLWYSLVRNLPQLLEIKVSDCKMITEIIAEPTSEADKEIDKIMFPKLRSLELENLPSLISFCSMPLKADKCLKKCGENDDDDKQCMPVALIVQKVEMPRLELLKLSNINSRKLWDDNLPGHSFVQNLTSLTIDKCGSIAYAFSSSVARDLVNLKYLQISNCQKLEEIFVSDGKLGNVSNSVVFPNLETLEISHMEHLKSLWHNQLAPNSFCKLKQLKIQSCNKLSIVFPSYVLDKLQNLEKLTVTNCPALEVLFETQSLQVEGGRQTGLKYENFTFQNLCQLELTGCKSLKYVFPFYVAKELQHLQVLCIIECGVESIVARDEINDTSPNSILIFPELKSLSFRQLTQLQNFYHGLHTLDCPVLRDVDVFHCDKFVLFEPMTLNYQDNVTVDILPLLSIEKVVSNTSKLILNCKDVTMLCNGQLNNEPIYTVKDLSLRCFHDVSDKFPSGFVQRFINLENLEVSCSSFTEVLLSESFGIGHSETTMKLRRLKLDGLPNLKFICREKFEKIHIYGCEIIEEIVASDDENDTSELAFMKLETLMLSNLPRLRSFCKGRHDFKFPLLRYLVVKDCPMMETFSHGVLNVPRLRRVRVNQQEPDKWHWNGDLNTTIRKYVAKNEL 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04091 1468 Gene3D - 308 394 IPR042197 -
Tsu02g04091 1468 Gene3D Ribonuclease Inhibitor 503 923 IPR032675 -
Tsu02g04091 1468 PANTHER - 1 1124 - -
Tsu02g04091 1468 SUPERFAMILY RNI-like 1279 1438 - -
Tsu02g04091 1468 CDD AAA 165 311 - -
Tsu02g04091 1468 SMART AAA_5 171 311 IPR003593 -
Tsu02g04091 1468 Pfam NB-ARC domain 159 391 IPR002182 GO:0043531
Tsu02g04091 1468 SUPERFAMILY L domain-like 463 911 - -
Tsu02g04091 1468 Coils Coil 107 127 - -
Tsu02g04091 1468 PRINTS Disease resistance protein signature 174 189 - -
Tsu02g04091 1468 PRINTS Disease resistance protein signature 341 355 - -
Tsu02g04091 1468 PRINTS Disease resistance protein signature 614 630 - -
Tsu02g04091 1468 PRINTS Disease resistance protein signature 248 262 - -
Tsu02g04091 1468 Gene3D Ribonuclease Inhibitor 1244 1451 IPR032675 -
Tsu02g04091 1468 Gene3D Ribonuclease Inhibitor 1108 1238 IPR032675 -
Tsu02g04091 1468 Gene3D Ribonuclease Inhibitor 934 1107 IPR032675 -
Tsu02g04091 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 405 IPR027417 -
Tsu02g04091 1468 SUPERFAMILY RNI-like 972 1221 - -
Tsu02g04091 1468 Gene3D - 142 307 IPR027417 -
Tsu02g04091 1468 Coils Coil 40 74 - -
Tsu02g04091 1468 PANTHER RPP4C3 1 1124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04091 Tsu-Chr2 47555279 47570169 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04091 162 475 WRKY Transcription Factor Family AT5G45050 26.380 7.31e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04091 - - mtr:MTR_2g071870 1907.49