Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04087 ATGGATTTTATTATTTCAGTTGGTTCTAAAATTGCTGAATTTATGGTTGCACCTATTGGACGGCAATTTGGTTACATTTTGTATTACAAGAGCAACCTTGTAAGAATGATAGCCGATGTCCAGAATCTAGAGGGAATAAAAGACAGTGTGCAACACGCTGTTGATGAGGCTAGACGGAACGGGGAAGAGATTGAAAGCATCGTTCAGAACTGGTTAAACAAAGTCGACAACACTGTTTCTGATgcaaaaaaacttattaacaCCGAAGGCCATGCAAAAGCTCAATGTTCTATGGGACACGTTCCCAATCTGTTCACAAGACACCAGTTGAGCAGGAGGATAAAAAAGACAATACAAGAGATTTCTGAAGTCAAAGCAGAAggaaaatttgacaaaatttcttACCGGGTTGCTTCGCAGGTCACAATAACCCCGTTCGGTAGAGGTTATGAGGCCCTGCACTCCAGAACATCAATGTTGAATGAGATTGTGCTGACATTGAAGAATCCTAGCATCTTCATTATTGGGGTGTATGGGATGGGTGGTGTGGGCAAGACCACACTAGTGAAAGAGTTAGCATGGCAAGTTGAGAATAACGGGTCATTTGATGCTGTTGTTATGACTGCTATAACTAGTTCTCCAGATGTGGAAAAAATCCAAGACCAAATTGCTGATGCCTTGGATCTTAAATTCAACAAGAAGACTATAGACGGAAGAGCAAGAGAATTGCGTGATAGGATAACCAAGGTTAAGAGTATTCTTATTATTTTGGATGACATATGGGAGAAACTTGATTTGACAGAGCTAGGCGTTCCTTTTGGTAATGATCACAAAGGGTGCAAGTTGGTGGTGACTTCCAGAGACCTTAATGTGTTGAACTGTGAGATGGGAACTCAGAAAGAATTTAGACTTGAAGTTTTACTCGAGGAGGATAGTTGGAAATTGTTTGAGAAAATGGCAGGTGATGTTGTTCAAGAATTCAATATAAAGCCAATTGCAGAAAAAGTGTCCAAATGTTGTGTTGGTTTGCCCCTTTTGATAGTTACAGTGGCAAAGGCTTTGAGGAAAAAGCAAGTCTCTGCTTGGAAGGATGCCTTAAAAGAATTAGAGAAATTTGATCAAGAAGGGTTACATAAGAAAGTTTACTCTACTCTAGAATTGAGTTATAATTGTTTAGAGAGTGACGAACTGAAGTTGCTATTCTTATTCATTGGCTCCTTTGGACTAGATTTCCATTACACTGGAAAACTGTTTTCATTTTATTGGGGGTTAGGCTTATATAGACACTCTCACACATTGACAAATGCAAAAACCAGATACGACAAATTAATAAACGACCTCAAGGCCTCTTCGTTGTTACTTGAGTCTGAACCTGAATGCATTAGAATTCATGATCTTGTTAGAGATCTGGCTAAATCAATTGCATGTAGGACTCGCCCAACCTATGGGGTGAAAAGGTTCACTGTGATAAAAGAATGGCCAGAGATAGATCAACTTCAAAAATGCCATCAGATCAGCATGCCTTGGTCTTATATTCACAAGCTTCCTGAGAAGCTGGAGTGCCCAGAGTTGAAGCTACTTCTACTTAATAATATCGGTGACTTTTTGAAAGTCCCCGATGACTTCTTCTCTGAGATGAGAGAGCTACAGGTCGTTGATTTACATGGAATGATATTTTCCCCTTCTCCACCACCATCACTGAGTCTCTTGACAAAACTCAAAACATTGAATCTTCCTGGATGTGTGTTCGAAGATATATCAATAGTTGCAGAGCTGAAAAGTTTAGAAATTCTCAGGCTTGAAAGATCTCATATTAAAGAGCTTCCAACAAAAATAGGACAGCTAACTAATCTTCGAATACTGAATTTAAGCAATTGCACTGGACTGAGATTCATTCCTGCAAATCTTATTTCAAGTTTAACATGCTTGGAAGAGTTGTACATGGGGAATTGCTTTATCCAATGGAATGTCAAGGGAAGCAAAAGCAACAATGCAAGTCTCGAAGAGCTAAGGAATTTGTCTCATCTAACTGCTTTAGACATAACGATTCAAGATACTTCAGTTTGGCCAAGGGACTTGCAAGTCTTTGAAAAGCTTGAAAGATACAACATATTTATTGGTGATAAGTGGAAATGGTCTTTGGATTCGTCTGGAAATGCTTCTGAATCTTCCAGAATACTTAAGCTCGAGGACAGTAGGAGTTCAAGTATTCTTTTGGATTGTGGGTTTAACTTCTTGATGAATTCAGCTGAGGACATGAACCTTGCCAAAATACATGTCAGAAATGTGCTTTATGAACTAAACATGGAAGGTTTTCCACAATTAAAGCATTTGTGCATTCAAGACAGTACTGATCTGAAGTTCATCATTAATTCAATGGGGTGGGTTCATCCCTATCCTGCTTTCCTCAACTTAGAGACTTTAACTCTTCAAAATCTCTTTAATCTGGAAGAAATTTGCCATGGGCCAATTCCAATTCAATGTTTTACCAAACTAAAATCTTTTGAAGTCAAAGGTTATGACAAGTTGAATACTCTGTTATGGCATTCTCTCATTAGAAACCTTCCACAACTTCTCGAAATAAAAATTTCTGATTGCAAAATGATTACAGAAATCATAGCTGAGCAAACATCTGAGGCTGATAAAGAAATCGACACGATTATGTTGCCCAATTTGCGTTCTCTTGAACTTGTATGTTTGCCTAGTCTCATTAGTTTCTGTTCTGTTTCATTGACAACTGATAAGAGTCTCAAAAAGTGTGGTGAAAATTATGATGATACACAGTGCATACCTGTGGCACTAATTGATAATAAGGTTGTGATGCCCCACCTTGAACTATTAAAGCTGTCTAAGATCAAATCTAGCAAACTGTGGGATGACAATCTTCCGGGATGTTCTTTCATTCAAAACTTGAAGAGTTTGACAATTGACGAATGTCACAACATAGTGTACGCATTCTCATCCTCAGTGGTTAGAGAACTTGTAAACCTGAAGCATCTTGCCATTAGTAATTGCCAAATGTTGGAGGACATCTTTGTCTCAGATGGAAAGTTCGGTAATCTTCCTTTATCTCAGAAACCATTTTCTAATGATGAGGTTGTATTTCCAAAGTTGGAGACATTAGAAATCTCCCACATGAAACAATTGAAGTCATTATGGCACAATCAACTTGCTCCAAATTCCTTCTACAAACTGAAGCAGTTGACCATTCAATGCTGCGATAAATTATCAAACGTATTTCCATCTTATGTGCTTGATAAATTACAGAATCTGGAGATAGTGACTGTAACTTATTGTCATGCTCTGGAAGTTGTATTTGAAACACAAGGTTTAAAAGCAGATGGTGGTAGACAGACAAGGCTGGAAATGCAATTGGGAACTCTCACTTTGAAACATTTACCGATGCTGAAACACATATGGAGTGGGAATCCTAATGAAAGCTTCAAGTTTCAAAACCTCTGCATTTTGAGAGTTAGTGAATGCAAAACCCTCAATCATGTTTTTGCCCTTTCTATGGCTAGAGAGATTCACCATCTCCAAGAgctatatatagaaaaatgtgGCGTAGAGATTATTGTATCACAAGATGAAACGGCTGACACAGATCCAGAACTTATTTTCCCAGAATTAACATCTTTGAGTTTTAAATCTTTGGCTCAACTTCAAAGCTTCTACGGTGGATCGCATAATTTGAATTGTCCTATTTTAAGACATGTGGATGTGTTTCATTGTGACAAGCTCGAACTATTCAAGCCAAAGTCTCTAAATTACCAAGACATTGTCCCAGTTGATACACTACCCCTTTTCTCAATTGAAAAGGTTGTCCGCAACACAAGGGAGCTTATTCTGAACAGCAAGGATGTCTCCATGTTGTGCAATGGTCAACTTAATGACGAGCTTCTCTACAAAGTACCTGCTCTTCACCTGCGATGTTTTTATGATGAGTCTGACAAATTTCCATCCAGTTTCCTCCAAAGGTTTATCAATATTGAAAATCTTCAGGTGTCCTGTAGTTCTTTCACAGAGATTTTCTTGAGTGGAAGTATTTGCACTGGACACTCTGAAACAACTATGAAGTTGAGAAGTTTATCACTCTGTTACTTGCAAAATCTCGAGTTTATCTGTGAAGAGAAATCAGAGGTGTACAATTGTGCTGGATTGGAAATTATTATGAAATCATCAACAGCTACTAGTTTACAAAAACTAAGAAAGTTGTGCATAATTGGTTGTGAAAACATAGAAGAAATAATTGCAAGTGATGATGAGAATGATGCTTCGGAGATAGCTTTTATGAAATTGGATCATCTGCATTTGAGTAACTTACCAAGGCTAAGAAGTTTTTGCAAGGGAAGACATGGCTTCAGATTTCCACTACTGGATGAGTTATTTGTAATAGATTGTCCCATAATGGAAACTTTCTCACATGGAGTGTTGTTTGCACCACGGCTCAGAGAAGTACAAGTAAATATTGAAGACGAAGATGAATGGCATTGGAAAGGTGACATTAATTCTACTATAAGTAAAATTGTAGCGAAAAAAGATAACCAGAACTCTAAGGAAGATTATAATTCATCGCGACCACTGGGTGCATCCACATGTTTTGGGTGCGAGGCTAATTGGCTAGTCCTTAATGGCGAAAAGCATTTACAACCATCATGA 4659 0.3773 MDFIISVGSKIAEFMVAPIGRQFGYILYYKSNLVRMIADVQNLEGIKDSVQHAVDEARRNGEEIESIVQNWLNKVDNTVSDAKKLINTEGHAKAQCSMGHVPNLFTRHQLSRRIKKTIQEISEVKAEGKFDKISYRVASQVTITPFGRGYEALHSRTSMLNEIVLTLKNPSIFIIGVYGMGGVGKTTLVKELAWQVENNGSFDAVVMTAITSSPDVEKIQDQIADALDLKFNKKTIDGRARELRDRITKVKSILIILDDIWEKLDLTELGVPFGNDHKGCKLVVTSRDLNVLNCEMGTQKEFRLEVLLEEDSWKLFEKMAGDVVQEFNIKPIAEKVSKCCVGLPLLIVTVAKALRKKQVSAWKDALKELEKFDQEGLHKKVYSTLELSYNCLESDELKLLFLFIGSFGLDFHYTGKLFSFYWGLGLYRHSHTLTNAKTRYDKLINDLKASSLLLESEPECIRIHDLVRDLAKSIACRTRPTYGVKRFTVIKEWPEIDQLQKCHQISMPWSYIHKLPEKLECPELKLLLLNNIGDFLKVPDDFFSEMRELQVVDLHGMIFSPSPPPSLSLLTKLKTLNLPGCVFEDISIVAELKSLEILRLERSHIKELPTKIGQLTNLRILNLSNCTGLRFIPANLISSLTCLEELYMGNCFIQWNVKGSKSNNASLEELRNLSHLTALDITIQDTSVWPRDLQVFEKLERYNIFIGDKWKWSLDSSGNASESSRILKLEDSRSSSILLDCGFNFLMNSAEDMNLAKIHVRNVLYELNMEGFPQLKHLCIQDSTDLKFIINSMGWVHPYPAFLNLETLTLQNLFNLEEICHGPIPIQCFTKLKSFEVKGYDKLNTLLWHSLIRNLPQLLEIKISDCKMITEIIAEQTSEADKEIDTIMLPNLRSLELVCLPSLISFCSVSLTTDKSLKKCGENYDDTQCIPVALIDNKVVMPHLELLKLSKIKSSKLWDDNLPGCSFIQNLKSLTIDECHNIVYAFSSSVVRELVNLKHLAISNCQMLEDIFVSDGKFGNLPLSQKPFSNDEVVFPKLETLEISHMKQLKSLWHNQLAPNSFYKLKQLTIQCCDKLSNVFPSYVLDKLQNLEIVTVTYCHALEVVFETQGLKADGGRQTRLEMQLGTLTLKHLPMLKHIWSGNPNESFKFQNLCILRVSECKTLNHVFALSMAREIHHLQELYIEKCGVEIIVSQDETADTDPELIFPELTSLSFKSLAQLQSFYGGSHNLNCPILRHVDVFHCDKLELFKPKSLNYQDIVPVDTLPLFSIEKVVRNTRELILNSKDVSMLCNGQLNDELLYKVPALHLRCFYDESDKFPSSFLQRFINIENLQVSCSSFTEIFLSGSICTGHSETTMKLRSLSLCYLQNLEFICEEKSEVYNCAGLEIIMKSSTATSLQKLRKLCIIGCENIEEIIASDDENDASEIAFMKLDHLHLSNLPRLRSFCKGRHGFRFPLLDELFVIDCPIMETFSHGVLFAPRLREVQVNIEDEDEWHWKGDINSTISKIVAKKDNQNSKEDYNSSRPLGASTCFGCEANWLVLNGEKHLQPS 1552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04087 1552 CDD AAA 156 286 - -
Tsu02g04087 1552 PANTHER - 4 1487 - -
Tsu02g04087 1552 Gene3D Ribonuclease Inhibitor 1275 1489 IPR032675 -
Tsu02g04087 1552 PRINTS Disease resistance protein signature 174 189 - -
Tsu02g04087 1552 PRINTS Disease resistance protein signature 247 261 - -
Tsu02g04087 1552 PRINTS Disease resistance protein signature 613 629 - -
Tsu02g04087 1552 PRINTS Disease resistance protein signature 340 354 - -
Tsu02g04087 1552 Gene3D - 306 393 IPR042197 -
Tsu02g04087 1552 Coils Coil 40 60 - -
Tsu02g04087 1552 SUPERFAMILY RNI-like 1302 1484 - -
Tsu02g04087 1552 Coils Coil 107 127 - -
Tsu02g04087 1552 SUPERFAMILY L domain-like 462 909 - -
Tsu02g04087 1552 Gene3D Ribonuclease Inhibitor 926 1251 IPR032675 -
Tsu02g04087 1552 PANTHER RPP4C3 4 1487 - -
Tsu02g04087 1552 Gene3D - 138 305 IPR027417 -
Tsu02g04087 1552 Pfam NB-ARC domain 158 390 IPR002182 GO:0043531
Tsu02g04087 1552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 404 IPR027417 -
Tsu02g04087 1552 Gene3D Ribonuclease Inhibitor 498 920 IPR032675 -
Tsu02g04087 1552 SUPERFAMILY L domain-like 937 1253 - -
Tsu02g04087 1552 SMART AAA_5 171 302 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04087 Tsu-Chr2 47495097 47529410 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04087 172 487 WRKY Transcription Factor Family AT5G45050 28.182 2.73e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04087 - - mtr:MTR_2g072030 2103.18