Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04020 ATGGCTTCATTCCAAACCTTCAATTTTGAAACTCAAATTCCACATGAGCATCTAATATCTCAAATCATGCAAATTCATGCAACAATTTCTAAGTTAGATTCTCTTAGGCCATCAAAACAAGTAAACAACCTTTTCACTCACTTAGTCAAACTTTGCATTCCCCCTTCATCCATTGACATTGAAACCTTACCTCAAGAGGTTAAGACAATGCGTGAGAGCCTCATCAAACTTTGTGGTAAAGCTGAAGGACTTTTAGAGCTTGAATTCTCAACTTTCATTAGCCTCACACCAAACCCAATGAAAAATTTAACACTTTTTCCTTACTATGGAAACTATGTTAAACTAGCAAATTATGAGAACAAAATTCTCAAAGAAAATGGTGTTGTCAATGCTAAAAAAATAGCTTTTATAGGATCTGGCCCAATGCCATTAAGTTCAATTATATTGGCTACACATCACATGGAATCAACTCACTTTGATAACTTTGATATTGATGAGAAAGCTAATGAGTTTGCTAGCAAGATTGTGGCTTCGGATAAAGCACTTGAGAAGAGAATGAAATTTGTGACACAAGATATTATGAAAGTGAAGGAAAGGTTAGGGCAATATGATTGCATATTTTTGGCTGCACTTGTTGGTATGAGTAGAGGTGAAAAAATGAAGGTTTTGGGACATATAAGAAAGTATATGAAAGAAGGTGGTGTTTTGCTTATAAGAAGTGCAAAAGGGAGTAGAGCTTTTTTGTATCCTATTGTTGATGAAAATGATGTGATGGATTTTGAGGTGCTTACCATTTTTCATCCAACAGATGATGTGATTAACTCGGTTGTTCTTCTTCAAAAGCCTAAAGCTTGA 855 0.3485 MASFQTFNFETQIPHEHLISQIMQIHATISKLDSLRPSKQVNNLFTHLVKLCIPPSSIDIETLPQEVKTMRESLIKLCGKAEGLLELEFSTFISLTPNPMKNLTLFPYYGNYVKLANYENKILKENGVVNAKKIAFIGSGPMPLSSIILATHHMESTHFDNFDIDEKANEFASKIVASDKALEKRMKFVTQDIMKVKERLGQYDCIFLAALVGMSRGEKMKVLGHIRKYMKEGGVLLIRSAKGSRAFLYPIVDENDVMDFEVLTIFHPTDDVINSVVLLQKPKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04020 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Tsu02g04020 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Tsu02g04020 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Tsu02g04020 284 Gene3D Vaccinia Virus protein VP39 16 283 IPR029063 -
Tsu02g04020 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 240 IPR029063 -
Tsu02g04020 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Tsu02g04020 284 CDD AdoMet_MTases 162 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04020 Tsu-Chr2 46742518 46743372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04020 18 281 Nicotianamine Synthase Gene Family AT5G56080 52.060 8.85e-93 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04020 K05953 - gmx:100819726 461.455