Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04019 ATGGCTTCATTGCAAACCTTCAACTTTGAAAGTCAAATTCCACATGAGCTTCTCATATCTCAAATCATGCAAATTCATGCAACAATTTCTAAGTTAGATTCTCTTAGGCCATCAAAACAAGTCAACACCCTTTTCACTCACTTAGTCAAACTTTGTATCCCCCCTTCTTCCATTGACATTGAAACCCTACCTCAAGAGGTTAAGACAATGCGTGAGAGCCTCATCAAACTTTGTGGCAAAGCTGAAGGACTCTTAGAGCTTGAATTCTCAACTTTCATTAGCCAAACACCAAATCCAATGAAAAATATAACACTTTTTCCTTACTATGGAAACTATGTTAAACTAGCAAACTATGAGAACACAATCCTAAAAGAAAATGGTGTTGTCAATGCAAAAAAAGTAGCCTTTATTGGATCTGGCCCAATGCCACTAAGTTCAATTATATTGGCAACTCATCACATGGAATCAACTCACtttgataattttgatattGATGAGAAGGCTAATGAAGTTGCGAGCAAGATCGTGGCTTCGGATAAAGCACTTGAGAAGAGGATGAAGTTTGTGACACAAAATATTATGGAAGTGAAAGAGAGGTTAGGGCAATATGATTGCATATTTTTGGCTGCACTTGTTGGTATGAGTAGAGGTGAAAAAATGAAGGTTTTGGGACATATAAGAAAGTATATGAAAGAAGGTGGTGTTTTGCTTGTAAGAAGTGCAAAAGGGAGTAGAGCTTTTTTGTATCCTATTGTTGATGAGAATGATGTGTTGGATTTTGAGGTGCTTACTATTTTTCATCCAACAGATGATGTGATTAACTCCGTAGTTCTTCTTCAAAAGCCTAAAGCTTGA 855 0.3637 MASLQTFNFESQIPHELLISQIMQIHATISKLDSLRPSKQVNTLFTHLVKLCIPPSSIDIETLPQEVKTMRESLIKLCGKAEGLLELEFSTFISQTPNPMKNITLFPYYGNYVKLANYENTILKENGVVNAKKVAFIGSGPMPLSSIILATHHMESTHFDNFDIDEKANEVASKIVASDKALEKRMKFVTQNIMEVKERLGQYDCIFLAALVGMSRGEKMKVLGHIRKYMKEGGVLLVRSAKGSRAFLYPIVDENDVLDFEVLTIFHPTDDVINSVVLLQKPKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04019 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Tsu02g04019 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Tsu02g04019 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 240 IPR029063 -
Tsu02g04019 284 CDD AdoMet_MTases 162 238 - -
Tsu02g04019 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Tsu02g04019 284 Gene3D Vaccinia Virus protein VP39 16 283 IPR029063 -
Tsu02g04019 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04019 Tsu-Chr2 46727040 46727894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04019 17 281 Nicotianamine Synthase Gene Family AT5G04950 50.558 1.71e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04019 K05953 - gmx:100819726 458.759