Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04009 ATGGCTAACAACAAGGTTGTTCTGTTGGATTCATGGGCAAGCATGTATGGGATGAGGGTTAGGATTGCATTAGCTGAAAAGGGTGTTCAATATGAATACAATGAACAAAATCTCATAAATAAGAGTCCTTTACTTCTTCAAATGAATCCAATTCACAAGAAAATTCCAGTTCTTATTCATAATGGAAAAACCATTTGTGAATCTGCAATCATTGTGCAATACATAGATGATGTTTGGAATGATAAAGCTTCAATCATGCCCTCTCACCCTTATGAGAGATCTCAAGCTAGATTCTGGGTTGATTATATTGACAAAAAGGTATATGATACTTGGAAGAAAATTTGGCTTTCAAAAGGGGAAGAACATGAGGAAGGGAAGAAAGAGTTGATCTCTATCTTTAAGACACTAGAGGAAAGATTGGGTGACAAGCCTTTTTATGGTGGTTCCACTTTTGGATTTCTTGATATTGGTTTGATCCCTTTTTATGGTTGGTTTTATACTTATGAGACATATGGTAACTTCAAAATTGAAGTGGAGTGTCCTAAACTCATTGTTTGGGCCAAGAGATGCATGGAGAAAGAGAGTGTGTCAAAAACTCTTCCTGATCAGAAGAAGTTGTATGATTATGTTGTGAGTGTGACAAAAGCACTTGGACTTGGTGAATCAAATCaataa 675 0.36 MANNKVVLLDSWASMYGMRVRIALAEKGVQYEYNEQNLINKSPLLLQMNPIHKKIPVLIHNGKTICESAIIVQYIDDVWNDKASIMPSHPYERSQARFWVDYIDKKVYDTWKKIWLSKGEEHEEGKKELISIFKTLEERLGDKPFYGGSTFGFLDIGLIPFYGWFYTYETYGNFKIEVECPKLIVWAKRCMEKESVSKTLPDQKKLYDYVVSVTKALGLGESNQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04009 224 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Tsu02g04009 224 CDD GST_C_Tau 90 210 IPR045074 GO:0004364|GO:0006749
Tsu02g04009 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 214 - -
Tsu02g04009 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Tsu02g04009 224 Gene3D - 89 220 - -
Tsu02g04009 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 211 IPR010987 -
Tsu02g04009 224 CDD GST_N_Tau 6 79 - -
Tsu02g04009 224 Pfam Glutathione S-transferase, C-terminal domain 122 189 - -
Tsu02g04009 224 SFLD Main (cytGST) 2 218 - -
Tsu02g04009 224 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Tsu02g04009 224 Pfam Glutathione S-transferase, N-terminal domain 8 76 IPR004045 -
Tsu02g04009 224 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
Tsu02g04009 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 -
Tsu02g04009 224 Gene3D Glutaredoxin 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04009 Tsu-Chr2 46630570 46633195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04009 4 219 Glutathione S-transferase Gene Family AT1G17180 60.648 4.23e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04009 K00799 - gmx:547950 370.548