Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03994 ATGGCATTGGAGTTAAGTTTCCATTccaaaaatgtgtttttttacttttacttgATTCTATTGTTTAGTCTTGGAATCTTTCTTGTAAGTTCAATCAATGAAGAGGGTTCAAATCTTTTGAAGTTCAAAACTTCACTTTCGGATTCAAATGGTAATCTTGTTAACTGGAATGTTTCTGATTTAACTCCATGCAATTGGACTGGTGTTTTTTGTATTGATTCAATAGTAACTTCTGTTAATCTTTACCACCTTAATCTCTCTGGTAATTTGTCGTCTAAAATCTGTAATCTTCCTTGGTTAGTTGAGTTGAATGTCTCCAAAAACTTCATCTCTGGTCCAATTCCTGATGGTTTTGTTAACTGTCGTAAACTCGaggttttagacctttgtaCAAATAGGTTTCATGGACCATTTTTGACTCCTATTTGGAAAATCAAAACACTTAGGAAGCTTTACGTTTGTGAAAACTACATGTATGGTGAAATACCAGAAGAGATTGGTAAATTAACATCACTTGAAGAGTTAGTGATTTATAGCAACAACTTAACCGGAAGCATTCCTGCATCGATCAGTAAATTGAAACGGCTTAGAGTTATTCGGGCAGGTTTGAATGGTCTTTCAGGAAAATTACCTTCAGAAATCAGTGAGTGTGAAAGCTTAGAAACATTAGGGTTAGCACAGAATCAGTTAGTAGGTTCTATTCCAAAAGAGCTTCAAAAGCTTCAGAACCTTACTAATTTGATTCTATGGCAAAACTCTTTTTCTGGTGAGCTTCCTCCTGAGATTGGAAATATTAGTAGCATTGAATTAATTGCTTTGCATCAAAATTCATTAATCGGTGATGTCCCGAAAGAGCTCGGGAGGTTACCGCGGTTGAAGAGGTTGTACATGTACACAAACCAGTTGAATGGAACAATTCCACCTGAGTTAGGAAACTGTACTAATGCTATTGAGATTGATCTATCTGAAAACCATTTGATTGGTATCATTCCTAAAGAGTTAGGTCGAATCTCTAATCTTACCTTGCTTCACCTATTTGAAAACAATTTGCAGGGTCATATTCCAAAGGAGCTTGGAAATTTGAGGCTGCTGAGGAATTTAGATTTGTCGTTGAACAACTTAACAGGTATAATTCCGTTGGAGTTTCAAAATCTTAAACTCATGGAGGATTTGCAGCTATTTGATAATCAACTTGAAGGTGTGATTCCACCTCATCTTGGAGCTTTTAGAAACCTTACTATTCTTGATATATCTTCAAATTATCTTGTCGGTATGATACCAAACCGTCTTTGTGAATATCAGAAGCTTCAATTCCTTAGCCTTGGATCAAATAGGCTCTTTGGAAACATTCCTTATAGATTGAAAACTTGTAAGTCACTTGTGCAGTTAATGCTTGGGGATAATCTTTTGACAGGAAGTTTACCTGTTGAATTGTACGAACTTAATAATCTTACCGCGCTCGAGCTTCATCAGAACAAATTCTCTGGGCTGATTAGCCCTGGAATTGGTCAACTTAGGAATCTAGAGAGGCTTCGCTTGTCAGATAATTATTTTTCAGGTTATCTACCTTCTGAGATTGGAAATTTGTCACAGCTTGTAACATTCAATGTTTCGTCTAACCGTTTCGGTGGAAGTATTCCGCACGAGTTAGGAAACTGTGTGAAGCTGCAGAGACTTGATCTCAGAAGGAACAAGTTTACTGGTATGCTTCCAAATTCAATTGGAAATCTTGTGAATTTGGAGCTACTAAAAGTTTCTGATAATACGCTTTTTGGAGAAATACCGGGCACTTTGGGGGACCTTATTCGTCTAACCGATTTGGAGCTCGGTGGAAATCGATTTTCAGGAAGCATCCCTTTTGGTTTTGGAAGACTCTCTGCTCTTCAGATAGCACTAAACTTGAGTCACAACAATCTTTCTGGTACAATTCCTGATAGCTTAGGGAGCTTGCAAATGCTAGAATCACTTTACTTAAATGATAATCAACTTGTCGGTGAAATTCCTTCATCAATTGGTGACTTGCTTAGTCTTTTGGTATGCAATGTATCTAACAATAAGTTGGTAGGAACTGTTCCTGACACAACTGCATTTAGAAAGATGGATTTAACAAATTTTGCCGGGAACAACGGTTTGTGCCGTGAAGATACTAATTGTCATCCATCTTTAACTTCATCTCATCATGCAAAGCCGATGAAAGACGGTTTATCAAGGGAAAAGATAGTGAGTATTGTCTCTGGTGTTGTTGGTTTCGTTTCTCTTATTTTCATAGCTTGTATATGTTGGACTATGATGAGGCGCCGCCGCAGCGATTCTTTTGTTTCGATTGAAGAACAACCAAAGCCTCATGTTCTAGATAATAGCTATTACTTTCCAAAAGAAGGCTTCACTTACAATGATCTCTTGGAAGCTACTGGGAATTTTTCAGAAAGTGAAGTTATAGGAAAAGGAGCTTGTGGAACTGTCTACAGAGCTGTTATGAATGATGGTGAAGTTATTGCTGTCAAGAAACTGAATACACGTGGCGGAGAAGGAACAAGCGTCGACCGAAGCTTCCTTGCAGAGATTTCAACTCTTGGAAAGATCAGGCACAGGAACATTGTGAAGCTGCATGGATTTTGTTATCATGAGGattcaaatcttctattgtATCAATACATGGAAAATGGAAGCCTTGGTGAAAAACTtcataattcaatttcaaaaacatgtGAACTAGATTGGAACATTAGATATAGAATAGCTCTAGGAGCTGCAGAAGGCTTATGCTATCTTCATTATGATTGTAAACCTCAAATCATTCATCGCGATATCAAGTCGAACAATATTTTGCTTGATCAAAGTTTTCGGGCTCATGTTGGAGACTTTGGATTGGCAAAGTTGATTGATTTTTCATTATCAAAATCTATGTCTGCTGTGGCTGGATCATATGGCTACATTGCCCCAGaATATGCTTACACGATGAAGGTGACTGAAAAATGTGACATCTACAGTTTTGGGGTAGTTTTGCTGGAACTAGTTACTGGGAAGTCACCAGTTCAACCATTGGAACAAGGTGGTGATTTAGTTAACTGGGTGAGAAGATCAATTCAAGCATCAGTACCTACATCTGAATTATTTGATAAGAGATTGGATTTGAGTGAACAAAAAACTGTTGAAGAAATGTCTCTTATTCTTAAAATTGCACTGTTTTGCACCAGCTCATCTCCACTTAATAGGCCTACAATGAGAGAGGTAATTGCAATGTTGATTGATGCTAGGGAATATGTCAACCAATCACCAACCTCTCCTTCATCTGAATCTCCACTTGATGAAGATAAAAGTTCTTCTTCCAAAGATGGTGGTCTTGAGTTGTGA 3354 0.3685 MALELSFHSKNVFFYFYLILLFSLGIFLVSSINEEGSNLLKFKTSLSDSNGNLVNWNVSDLTPCNWTGVFCIDSIVTSVNLYHLNLSGNLSSKICNLPWLVELNVSKNFISGPIPDGFVNCRKLEVLDLCTNRFHGPFLTPIWKIKTLRKLYVCENYMYGEIPEEIGKLTSLEELVIYSNNLTGSIPASISKLKRLRVIRAGLNGLSGKLPSEISECESLETLGLAQNQLVGSIPKELQKLQNLTNLILWQNSFSGELPPEIGNISSIELIALHQNSLIGDVPKELGRLPRLKRLYMYTNQLNGTIPPELGNCTNAIEIDLSENHLIGIIPKELGRISNLTLLHLFENNLQGHIPKELGNLRLLRNLDLSLNNLTGIIPLEFQNLKLMEDLQLFDNQLEGVIPPHLGAFRNLTILDISSNYLVGMIPNRLCEYQKLQFLSLGSNRLFGNIPYRLKTCKSLVQLMLGDNLLTGSLPVELYELNNLTALELHQNKFSGLISPGIGQLRNLERLRLSDNYFSGYLPSEIGNLSQLVTFNVSSNRFGGSIPHELGNCVKLQRLDLRRNKFTGMLPNSIGNLVNLELLKVSDNTLFGEIPGTLGDLIRLTDLELGGNRFSGSIPFGFGRLSALQIALNLSHNNLSGTIPDSLGSLQMLESLYLNDNQLVGEIPSSIGDLLSLLVCNVSNNKLVGTVPDTTAFRKMDLTNFAGNNGLCREDTNCHPSLTSSHHAKPMKDGLSREKIVSIVSGVVGFVSLIFIACICWTMMRRRRSDSFVSIEEQPKPHVLDNSYYFPKEGFTYNDLLEATGNFSESEVIGKGACGTVYRAVMNDGEVIAVKKLNTRGGEGTSVDRSFLAEISTLGKIRHRNIVKLHGFCYHEDSNLLLYQYMENGSLGEKLHNSISKTCELDWNIRYRIALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDQSFRAHVGDFGLAKLIDFSLSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGKSPVQPLEQGGDLVNWVRRSIQASVPTSELFDKRLDLSEQKTVEEMSLILKIALFCTSSSPLNRPTMREVIAMLIDAREYVNQSPTSPSSESPLDEDKSSSSKDGGLEL 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03994 1117 SUPERFAMILY Protein kinase-like (PK-like) 782 1082 IPR011009 -
Tsu02g03994 1117 ProSiteProfiles Protein kinase domain profile. 807 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03994 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
Tsu02g03994 1117 ProSiteProfiles Leucine-rich repeat profile. 80 101 IPR001611 GO:0005515
Tsu02g03994 1117 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 19 1094 - -
Tsu02g03994 1117 Gene3D Ribonuclease Inhibitor 191 270 IPR032675 -
Tsu02g03994 1117 PANTHER OS07G0152200 PROTEIN 19 1094 - -
Tsu02g03994 1117 SMART LRR_typ_2 650 674 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 409 433 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 505 528 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 554 576 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 529 553 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 241 265 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 361 384 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 169 193 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 289 313 IPR003591 -
Tsu02g03994 1117 SMART LRR_typ_2 577 601 IPR003591 -
Tsu02g03994 1117 Pfam Leucine Rich Repeat 555 577 IPR001611 GO:0005515
Tsu02g03994 1117 Pfam Protein kinase domain 808 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03994 1117 Gene3D Transferase(Phosphotransferase) domain 1 886 1105 - -
Tsu02g03994 1117 Pfam Leucine rich repeat 603 663 IPR001611 GO:0005515
Tsu02g03994 1117 SMART serkin_6 807 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03994 1117 Gene3D Ribonuclease Inhibitor 271 386 IPR032675 -
Tsu02g03994 1117 Gene3D Ribonuclease Inhibitor 387 727 IPR032675 -
Tsu02g03994 1117 SUPERFAMILY RNI-like 318 694 - -
Tsu02g03994 1117 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Tsu02g03994 1117 MobiDBLite consensus disorder prediction 1090 1117 - -
Tsu02g03994 1117 ProSiteProfiles Leucine-rich repeat profile. 363 384 IPR001611 GO:0005515
Tsu02g03994 1117 Gene3D Phosphorylase Kinase; domain 1 772 885 - -
Tsu02g03994 1117 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Tsu02g03994 1117 SUPERFAMILY L domain-like 46 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03994 Tsu-Chr2 46382949 46387933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03994 57 1087 Receptor kinase-like Gene Family AT1G73080 38.126 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu02g03994 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03994 - - gmx:100818311 1728.38