Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03966 ATGGCTACCGAAAACACCAACGCAGAAACCGTTGCCAAAGCCGTAGACTCTCTTCTCAAATGGCGAAAATCAAAGCAACAAACCGAAAAACCAAAACTCTTCGATGAAGACGAAGAATTCGTTTACCTTAttctaaccctaaaaaaaattccacacaACAGTCGCGTTAACCCTCACAAAATCCCAATCCCTCATTCCCTCCTCTCATCGTCGTCGGAACAATGTCTCATCATCGATGACAGAGCCAACAAGCCAGCTCGTCTCACCAAAGACGAAGCTCAGAAGAAGATTCAATCTGAATCAATTCCTATCTCGAAAGTTCTTAAGCTTTCGAAACTCGCTTCTGATTATCGTCCGTTTGAGGCGAAACGGAAGCTTTGTAATTCATATGATCTgttttttgctgataagactaTTGTTCCATTGTTGCCGAGGTTGTTAGGGAAACAGTTTTTCAAGAAGAGGAAGCTTCCGGTGCAAGTtgatttgaagaagatgaattggaaGGAGCAGATTGAGAAGGCTTGTTGTTCTGCTTTGTTGTTTTTGAGGACTGGGACTTGTAGTGTTCTTAAGGTAGCTAAGTTGAGTATGGAGAGAGATGAGATTGTTGAGAATGTGGTTGCTGCTATGGAGGGTGTGGTCGAGGTTTTTCCGAAGAAGTGGGCTGTTGTTAGGTCTTTTCATGTTAAGTTATTGGAGAGTCTTGCTTTGCCTATTTATCAGGCTGTTCCTGATGTTAAGTTGAAAATTGAGGGTGTTAAGGATTTGGAGGCTGCTTTGGAGAAGGAGGAGAAGAAAAAGGATCGTGATGGGAAAGATGGGAAGAAGAGTAATAAGAAGAAGGGGAGGATTCATGAGATTAAGTTTATGGATGATAAAATGAGTGAGGATGGTACGGATCGTGAGGATGTTACGGATCATGAGGatgttgatggtgatgatgttgttgatggaGTTGATTTGGTTGATGATGATATTGAGAGTGAAGGATTGGTAAGTAAGAAGGGTAAAAAAGGAATTAAAAAGCGGGATTCTAGTGAGTTGGGGAGTGTGAAACCGGCAAAGGGTTCTGctaaaaggaagaagaaagatgGGTCTGCTGTGAATGAAGCAGAAGGTTCGATCAAGAAGGGTAGCGccgaaaagagaaagaaattatCGGTGAAGGATGAGGGTTCggataagaagaaaaagaggtTGGCTGTGAAAGGTGCAGAAGAAAGCTTGATCAAGAAGAGTGAAAAGGTTGAGGTTGCGGGTTCggacaagaagaagaaaaggacaGTGGATGTGAAAGCTGCAAAAGAAGCTTTGATCAAGAAGACCGAAAAGAAATTATCTGGCGAGGATGTGGGTTTGGACAAGAAGACAAAGAGAGCAGATGCGAAGGTAAAGGCTAAGAAAACTAAGAAGGCTGTATGA 1425 0.3789 MATENTNAETVAKAVDSLLKWRKSKQQTEKPKLFDEDEEFVYLILTLKKIPHNSRVNPHKIPIPHSLLSSSSEQCLIIDDRANKPARLTKDEAQKKIQSESIPISKVLKLSKLASDYRPFEAKRKLCNSYDLFFADKTIVPLLPRLLGKQFFKKRKLPVQVDLKKMNWKEQIEKACCSALLFLRTGTCSVLKVAKLSMERDEIVENVVAAMEGVVEVFPKKWAVVRSFHVKLLESLALPIYQAVPDVKLKIEGVKDLEAALEKEEKKKDRDGKDGKKSNKKKGRIHEIKFMDDKMSEDGTDREDVTDHEDVDGDDVVDGVDLVDDDIESEGLVSKKGKKGIKKRDSSELGSVKPAKGSAKRKKKDGSAVNEAEGSIKKGSAEKRKKLSVKDEGSDKKKKRLAVKGAEESLIKKSEKVEVAGSDKKKKRTVDVKAAKEALIKKTEKKLSGEDVGLDKKTKRADAKVKAKKTKKAV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03966 474 MobiDBLite consensus disorder prediction 263 278 - -
Tsu02g03966 474 MobiDBLite consensus disorder prediction 263 408 - -
Tsu02g03966 474 MobiDBLite consensus disorder prediction 328 350 - -
Tsu02g03966 474 MobiDBLite consensus disorder prediction 303 327 - -
Tsu02g03966 474 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 7 300 - -
Tsu02g03966 474 MobiDBLite consensus disorder prediction 285 302 - -
Tsu02g03966 474 MobiDBLite consensus disorder prediction 448 474 - -
Tsu02g03966 474 CDD Ribosomal_L1 11 240 IPR028364 -
Tsu02g03966 474 Coils Coil 247 274 - -
Tsu02g03966 474 MobiDBLite consensus disorder prediction 361 408 - -
Tsu02g03966 474 Gene3D - 84 177 IPR016095 -
Tsu02g03966 474 Pfam Ribosomal protein L1p/L10e family 18 235 IPR028364 -
Tsu02g03966 474 SUPERFAMILY Ribosomal protein L1 11 241 IPR023674 -
Tsu02g03966 474 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 300 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03966 129 231 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 27.184 6.92e-07 48.5