Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03903 ATGGCCTGCACTTGCATCTCCTCTTCCATTTTCACTCCTCTTCAACTCCGCCACCGTCCACCACATTTCTCTGCTGCCACTTTTCACCCTTTTCCCTCCATTCAACTAACCCCTTCTCACCCATTTTGCCTTTCCGCCCTTCCCCTCTTAACCAGCAACAACAATGATGGTGGTGGTTTCTGGGGTAATAACCCTTTTGGCTCAGATGGTGATTctcattcatcttcttcagAACCTACTGCGGCATCTTGTAGTGAAAACACGGAGGAAGAAAGCTCGTCGCTGCCTATTGAAACAACAATCGGAATTGACATTGGTAGGTGGCCATGTTGTATTTCTGTGTGGAATGGTTCCAAAGTGGAGctttggaaaaagaaaataaatgagatGATGAAGAGATCTTGCGAAACTTCCAAAGATCATGACTTTTCCATTGGAGATAGTAGTACTGAAGTCTCACTCTCACACTCCCTAGAAAATGAGATTACAATTTTATACATGAAAGACATTTGTAGCATAATTTTTGGTGAAAATGCAAATTTCCCATTTCTGATGCACACCGAGGACATTAAGGTCCGCCCTTTTGTTGCTGCATTTGTGAACAAGCTGTGGAAATCCACTACTGCAGAAGAACTACTTGGAAAATTTCTGATAGAATTAAGATCCATGGTTGAAACTCATCTGAACAGACCTATAAGAAATGTAGTGTTTACAGTTCCTGTTTCATTTAGTCAATTGCAGCTAAACTGGATACAACGTGCTTGTGCGATGGCCAATCTTAAAGTTATCAGACCGATGCCTAAACCAAAAGCAGTGGCTTTGTGGTATATGGTTCATCAACTGAATTTTTCTGCTTCTTCTCATGAGGATATGGAAAATGAAAGCATGAAAATTGCTCTCATTTTCAATATGGATGCGGGTTATTGTGATGTTTCTGTTATTGAAGCAGAAAGAGGAAAATTCCGAATAAAAGCATCGACAGGAAGTACTATTGGTGGAAAAGATTTGCTTGGAAATATGATGTGTCATCttttacctgattttgaagagATATTCAAGAGACTTGTTCATTGGAACTCAGAAATTATATTAATGGCTTTTCTTCGAAGTAGAATCCATGACGTGATTACTAAGCTTTCGTCTGAGACAAGTGTTGAGGTTGACTTAGATTTGGGATATGGTTTGAAGATATGCAAGGTTGTAACGCGGAAGGAGTTTGAGGAAGTTAACAAAGAAGTGTTTGAGAAGTGTGAAAAGTTAATCATCCAATGCTTACAAGATGCAAAGATAGAAGTTGAGAATATAAATGATGTGATAATTGTAGGTGGATGTTGTAATATACCAAGGGTGAAGAATCTTGTTACGGAAATATGCAATGGAAAGGAAATTTATAAAGGTATAGATCCTTTGAATGGTGTACTTTATGGTGCAGCAGTGGCAGGAGCTGTTGATGATGCCATTGGTAAAGTCATAATATCCAAAATATAG 1488 0.3763 MACTCISSSIFTPLQLRHRPPHFSAATFHPFPSIQLTPSHPFCLSALPLLTSNNNDGGGFWGNNPFGSDGDSHSSSSEPTAASCSENTEEESSSLPIETTIGIDIGRWPCCISVWNGSKVELWKKKINEMMKRSCETSKDHDFSIGDSSTEVSLSHSLENEITILYMKDICSIIFGENANFPFLMHTEDIKVRPFVAAFVNKLWKSTTAEELLGKFLIELRSMVETHLNRPIRNVVFTVPVSFSQLQLNWIQRACAMANLKVIRPMPKPKAVALWYMVHQLNFSASSHEDMENESMKIALIFNMDAGYCDVSVIEAERGKFRIKASTGSTIGGKDLLGNMMCHLLPDFEEIFKRLVHWNSEIILMAFLRSRIHDVITKLSSETSVEVDLDLGYGLKICKVVTRKEFEEVNKEVFEKCEKLIIQCLQDAKIEVENINDVIIVGGCCNIPRVKNLVTEICNGKEIYKGIDPLNGVLYGAAVAGAVDDAIGKVIISKI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03903 495 SUPERFAMILY Actin-like ATPase domain 298 483 IPR043129 -
Tsu02g03903 495 Gene3D - 292 464 - -
Tsu02g03903 495 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 91 486 - -
Tsu02g03903 495 Gene3D Actin; Chain A, domain 4 333 416 - -
Tsu02g03903 495 PANTHER HEAT SHOCK PROTEIN 70KDA 91 486 IPR013126 GO:0005524|GO:0140662
Tsu02g03903 495 MobiDBLite consensus disorder prediction 61 96 - -
Tsu02g03903 495 Gene3D - 165 215 - -
Tsu02g03903 495 SUPERFAMILY Actin-like ATPase domain 99 279 IPR043129 -
Tsu02g03903 495 Gene3D - 101 481 - -
Tsu02g03903 495 PRINTS 70kDa heat shock protein signature 467 487 - -
Tsu02g03903 495 PRINTS 70kDa heat shock protein signature 307 317 - -
Tsu02g03903 495 PRINTS 70kDa heat shock protein signature 435 451 - -
Tsu02g03903 495 PRINTS 70kDa heat shock protein signature 99 112 - -
Tsu02g03903 495 CDD HSP70_NBD 186 469 - -
Tsu02g03903 495 Pfam Hsp70 protein 101 484 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03903 Tsu-Chr2 44997858 44999436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03903 100 483 Calmodulin-binding Proteins AT5G02500 29.847 1.94e-49 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03903 K09489 - gmx:100809773 376.326