Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03886 ATGCTGACAAAGCTAGGGTGCAGCCTGAAGTCGGAGGAAAAGGACTTGATGGGTAAGCCTTTGATGAAACGTGTCATGCAGACATGGCTTCCAGCAAGCAGCGCACTTCTTGAAATGATGATCTTTCATCTTCCCTCTCCATCTACAGCTCAGAGGTATCGTGTTGAGAATTTGTACGAGGGTCCCCTTGATGATCAATATGCTAATGCTATCAGAAACTGTGACCCTGAAGGACCTCTGATGCTTTATGTGTCAAAGATGATTCCCGCTAACGATAAAGGAAGGTTTTTTGCTTTTGGACGTGTGTTTGCTGGTAAAGTTTCAACTGGTTTGAAGGTTAGAATTATGGGACCAAATTTTGTCCCTGGTGAGAAGAAAGATTTGTATGTGAAAAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAGGCAGGAAACTGTTGAGGATGTGCCTTGTGGTAACACAGTTGCTATGGTTGGTTTGGATCAATTTATCACCAAGAANCGCTACATTGACAAATGA 522 0.431 MLTKLGCSLKSEEKDLMGKPLMKRVMQTWLPASSALLEMMIFHLPSPSTAQRYRVENLYEGPLDDQYANAIRNCDPEGPLMLYVSKMIPANDKGRFFAFGRVFAGKVSTGLKVRIMGPNFVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKXRYIDK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03886 173 Gene3D Translation factors 47 172 - -
Tsu02g03886 173 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 168 - -
Tsu02g03886 173 CDD EF2_II 79 167 - -
Tsu02g03886 173 Pfam Elongation factor Tu domain 2 98 164 IPR004161 GO:0005525
Tsu02g03886 173 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 1 168 - -
Tsu02g03886 173 SUPERFAMILY Translation proteins 46 168 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03886 Tsu-Chr2 44856393 44856914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03886 1 167 Eukaryotic Initiation Factors Gene Family AT1G56070 91.617 2.11e-109 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03886 K03234 - fve:101310872 312.768