Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03857 ATGAACTCATCCTGGAGAAAATATCATGTCATTACTTCGGCCATAACAGATACAGTCCGTCGCAAACTTATTGGGCTTGTCACTTCAAGAGATGAAATTCCAGATCCACTCGAGTTGGATGATGTTATAGATCTTGTGGTCCCTAGATGCAGTAATAAGCTTGTTTCTCAAATTAAGGCGTCAACAAAAATCCCTGTACGGTTCTTGGCCATGCTGGCTGTGAAAACAATGAAGAAGGGAGAGAAAGTTCTCTTGAAGAATGCATTTGGTGAGAGTGGAAAACCTTCATCAGGAGATGATGGTGTTGTGCCTCCTAATGCTTCGCTCCAAATGGATCTTGAGTTATAG 348 0.4195 MNSSWRKYHVITSAITDTVRRKLIGLVTSRDEIPDPLELDDVIDLVVPRCSNKLVSQIKASTKIPVRFLAMLAVKTMKKGEKVLLKNAFGESGKPSSGDDGVVPPNASLQMDLEL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03857 115 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 8 67 - -
Tsu02g03857 115 MobiDBLite consensus disorder prediction 89 115 - -
Tsu02g03857 115 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 8 67 - -
Tsu02g03857 115 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 78 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03857 Tsu-Chr2 44492446 44493278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03857 73 115 Calmodulin-binding Proteins AT3G25230 63.830 1.62e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03857 K12657 - jre:109004862 92.8189