Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03853 ATGGGACCTGGAAGATCAAAGTTTATTATAAGCAGGGATGTTACTTTTGATGAGAACCGAATggggatgaagtgcaaagacctGGAAGAAATACCAGAAACTTGGGTGGAGAAAAttcagtttgaggtggagccttCCACTGATGAGAGGATAGAGGAGGATCAGACTCAAGTACCTAAAGATAGTGGAActgaagaATTGCAAGACTCAGAACTAAAGAACTTCAAGGAGGCATCCGAAAGCATAGATGGCAAGGATTCGTTGAAGGaaatgaatgaggaaatgcttTCATTGGAGAAGAACCATACTTGGGAACTTGTACCATTGCCTAAAAAGAAAAGGGGTAGCATTACTCACGGGACAATGTTGATACTTCTTGCCGGAAGATTTAAGGGAAAGATAATAGTGTTTCTCAAGCAATTTTCTTTTGGACGACTTCTCGTAATtgGTATTGACAAAGAGTGGACTAAACTCCCAAGACATTGGAAGAAATATAGGATAGGTGTTAAGGCTTTTTTAGATTTTGCGTATACCAATGGAAGTCCTCAAGGGCGTGAAATTTCTTGTCCTTATGCTCATTCTACAAATGATATTCCCTTGCCTATGGAAGTCGACGAGGACTCAAATGATCAAGAAGACTCGCACGCGACGACATGGATGGCTTATTGCATGACATTTTCGGAAATGTGGTCGAAAGCAAAGGGGCAGCCTAGGGAAAGAGTTGTGTCTAAAGATGAGTTGAGAGCAAAAGAGCAACCTATGAAAAGGATGGTCGATGAAGATGAGTCAAGGACAAGGCAGGAAAGTGCTAGAAAGAAGTCAAAAAGAACCGTTGTGTGTCCATCAATGTTAATTGATGATTTCCTTAAAGAAAATGGAAAAGATGTTGAAAAAGAGATCGAAAAGTTAATTGAAGATGAAGGAGATATTGTTAtggaagaacaagaacaagaggAGAATGTGGATTGTGAGGAAGCTGCTGAAACAAATGAATTTCGCAATTTCCTTGGCACTATAGCAAGGAATTCAGATTTTTGTCCTTCGATCTATACGAACTTCAAAGAGTTGCTAAAAGAGGAAGCAAAAAAGGATCATATCGGTCGTAAGGAGCGTATATGGAGTTTTGTTCAAagcTATTACATTATTCCTGATGAAGGAGAAAAAGCTGTGTTTTATAGCATAAATTTGGCTTGGAGACGCTATAAATTTGATATCAAGAAAGACCATTTCCTAAAGTACACTAGTATGAAGCAGAGATTAAAAAATCGTCCTGAAGGCATATCTGAAGATCACTTCAAGAAACTGTTGATATATTGGAAAGATAGCAAAGTCCAAGCCATTAGCCAAAAAAATGCAGTGAATAAGAGCAAGCAAAAGTTTAGGCATCGTGTGGGACCAAGGAATTTTGCTAGAATTCATGCAAAAGTGCGGGAAGAGAAGGATAGAGAAGTCACCCAAGCTGAAGTTTTTATTGAAACTCGCCAAAgtagaaaaggaaaagaagtcGATGGAGAAACACAAGTTGCTATAgaTAAACTTCAAGAGTCGATTGAACAATCAACTGAAACTGCAAAACAAACATTTCACTTACTGTTTGGGAAAGAAAGGTCCGGTAGAATGCGTTGCCATGGAAGAACTGTTACACCATCATCTTtaaggaaaaaagaagaaatttctTTAGTGAAAAAACAATATGATGGTAAAATTGCTGACATGTCAATGAAGATGGGAGCAATGGAAGTTAGCAACGAAAATTATCATTATCAAGATGATGATCTTCAAGGtgatcaagaagatgatgatccTAATGATCATGAACATGATGAATATGATGACCAACATTGA 1845 0.348 MGPGRSKFIISRDVTFDENRMGMKCKDLEEIPETWVEKIQFEVEPSTDERIEEDQTQVPKDSGTEELQDSELKNFKEASESIDGKDSLKEMNEEMLSLEKNHTWELVPLPKKKRGSITHGTMLILLAGRFKGKIIVFLKQFSFGRLLVIGIDKEWTKLPRHWKKYRIGVKAFLDFAYTNGSPQGREISCPYAHSTNDIPLPMEVDEDSNDQEDSHATTWMAYCMTFSEMWSKAKGQPRERVVSKDELRAKEQPMKRMVDEDESRTRQESARKKSKRTVVCPSMLIDDFLKENGKDVEKEIEKLIEDEGDIVMEEQEQEENVDCEEAAETNEFRNFLGTIARNSDFCPSIYTNFKELLKEEAKKDHIGRKERIWSFVQSYYIIPDEGEKAVFYSINLAWRRYKFDIKKDHFLKYTSMKQRLKNRPEGISEDHFKKLLIYWKDSKVQAISQKNAVNKSKQKFRHRVGPRNFARIHAKVREEKDREVTQAEVFIETRQSRKGKEVDGETQVAIDKLQESIEQSTETAKQTFHLLFGKERSGRMRCHGRTVTPSSLRKKEEISLVKKQYDGKIADMSMKMGAMEVSNENYHYQDDDLQGDQEDDDPNDHEHDEYDDQH 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03853 614 MobiDBLite consensus disorder prediction 580 614 - -
Tsu02g03853 614 Pfam Plant transposase (Ptta/En/Spm family) 429 549 IPR004252 -
Tsu02g03853 614 PANTHER OS10G0409366 PROTEIN-RELATED 37 566 - -
Tsu02g03853 614 SUPERFAMILY Translation proteins SH3-like domain 115 165 IPR008991 -
Tsu02g03853 614 MobiDBLite consensus disorder prediction 42 69 - -
Tsu02g03853 614 MobiDBLite consensus disorder prediction 235 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03853 Tsu-Chr2 44406087 44415423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03853 108 179 Cytoplasmic Ribosomal Protein Gene Family AT1G18540 50.685 1.77e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03853 - - lja:Lj0g3v0289679.1 322.783