Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03842 ATGAAGCAGTTAATTCGCCGTTTATCTCGAGTCTCCGACTCATCTCAATACACACTACTCCGAAACGATTCAATTCATCGCCGGCAAACAGGCAATAGCCGTAGCAGGCGAGTTGAATCATTTCGTCTTGTCTTGTCGAAGATCCGGAGATCTTCTTCCGCGGTTGTCCCAGAAGGACATGTTCCGATCTACGTCGGAGATGAGATGGAACGGTTTGTTGTTTCTGCAGAGATTCTTAATCATCCGGTTTTTGTTAAGCTTTTGAATGAATCGGCGCAGGAATACGGTTATGAACAGAAAGGTGTTCTTCGGTTACCGTGTCATGTTTTCGTTTTTGAGCGCGTGGTTGAAGCGTTGCAGCTAGGACTCGACACGCGCCACATCAATGAAATGCTTAATTCATCACAAGAAGAATTCTGTTAA 423 0.4515 MKQLIRRLSRVSDSSQYTLLRNDSIHRRQTGNSRSRRVESFRLVLSKIRRSSSAVVPEGHVPIYVGDEMERFVVSAEILNHPVFVKLLNESAQEYGYEQKGVLRLPCHVFVFERVVEALQLGLDTRHINEMLNSSQEEFC 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03842 140 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 138 - -
Tsu02g03842 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 138 IPR003676 GO:0009733
Tsu02g03842 140 Pfam Auxin responsive protein 14 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03842 Tsu-Chr2 44174842 44175657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03842 51 120 Calmodulin-binding Proteins AT4G31320 37.143 2.01e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03842 K14488 - gmx:100806044 200.675