Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03828 ATGTGCTCTGCCACTGCCACAACACCTTTCATTCGTCTCTGCAAACCCTTTCATTCTAGGGTTCCTACTTCCCTTACCTTCAATTCCACTAGACCTACTTTCTTTGTTAGGGCTACGGTGATAAAATGGCGATGTCCAAATCAAACTCTACCTCCCAACAGCGATACCAGTTTCCAAAAAAAGGCCTTGTATCTGGAATCTATCGGCATCGACTCTTTCTCACTTATTGAAAATCATCCAATGCTGATCACTGCCTCACTTAATGATATAAAATCTACCGTGGAATACATTACCGGTATGGATTTCACTGCAATCGAGTTTCGACGTATGGTTGGCATGTGCCCAGAGATTCTTACCACCAAAGTCTCAGACATTATACCGGTCTTCATGTTTCTTCACGAAGAAGTTCGTGTAAGTGGCTCAAATATCAAGCATGTAATAAACCGTCGTCCTCGGTTAATTATCTGCAACGTCGATAAGCAACTTCGTCCTACCATGTATTTCCTCCAAAGTATCGGCATAAAAGATATAAGCAAACACACCGATTTGTTATCATGTAGTGTTGAAGAAAGGTTTATGCCCCGAATCGAATACTTTGAAAATATCGGATTCTCTCATCGCGACACAACTAAAATGTTTCGAAGATTTCCTCAGCTGTTTTGTTTTAGTATTAAGAATAGTTTGGAGCCAAAATACAATTACTTTGTGGTGGAAATGGGGAGAGATTTGAAGGAGGTGAAAGAATTTCCACAATATTTCTCATTTAGTTTAGAGAATAGGATTAAGCCTAGACATAAAAGGTGTGTAGAAATGGGTGTGTGTTTTCCACTTCCTTTGTTATTAAAATCTAGTGAAGTGACATTTCAGAATAGATTAGAAACATTTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTGTGGAGTGCTGGTCATAATATTGATCAAGTATAG 954 0.3878 MCSATATTPFIRLCKPFHSRVPTSLTFNSTRPTFFVRATVIKWRCPNQTLPPNSDTSFQKKALYLESIGIDSFSLIENHPMLITASLNDIKSTVEYITGMDFTAIEFRRMVGMCPEILTTKVSDIIPVFMFLHEEVRVSGSNIKHVINRRPRLIICNVDKQLRPTMYFLQSIGIKDISKHTDLLSCSVEERFMPRIEYFENIGFSHRDTTKMFRRFPQLFCFSIKNSLEPKYNYFVVEMGRDLKEVKEFPQYFSFSLENRIKPRHKRCVEMGVCFPLPLLLKSSEVTFQNRLETFVNSSTPLKTSPLWSAGHNIDQV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03828 317 Gene3D Transcription termination factor 3, mitochondrial 125 298 IPR038538 -
Tsu02g03828 317 Pfam mTERF 178 289 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 Pfam mTERF 53 139 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 SMART mt_12 210 242 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 SMART mt_12 243 274 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 SMART mt_12 176 205 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 PANTHER CGI-12 PROTEIN-RELATED 51 301 IPR003690 GO:0003690|GO:0006355
Tsu02g03828 317 PANTHER OS03G0360600 PROTEIN 51 301 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu02g03828 mTERF 2.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03828 K15032 - gmx:100804440 511.531