Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03809 ATGGAACCTAGAAATGAATACCAGCCGGGATTGCCATCAGTAACGCATGATCATATGGATGACATTTATTCGAGTAGAAGAACGCATGACCTCAATACAGCAGAAGTTAAACCGGTACAACATTACTCAATACAAACGGGCGAGGAATTTGCTCTCGAGTTTATGAGAGATAGAGCGAATCTCGGTAAGCCTGTATTTCCGAATGTCGGTGATCCGAATTATGCAACTGGTTATATGGAACTGAAAGGAATTTTAGGTATCAGTCACACAGGATCTGAAACTGGATCAGACATTTCCATGCTATCAATGATGGAGAAATATCCTAAAGAGTTTGATAGAAGCCAGTATGGATCAATTCGATCAATACCAAGATCTTCCCTGAATCAGGACAACAGACAGTTTGTGCACGGATATAGCTCTTCCGAAAGTTATGATAACTCATCAATCATGATGAAGTTCCTTTGCAGCTACGGTGGTAGAATATTGCCACGGCCACGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGTATTCTCCGTATAAGAAAGGACATATCTTATCACGAGCTCATTCAGAAAGCATTGGTGATCTATAACCAGGTTCATACAATTAAGTATCAGCTTCCTGGTGAAGATCTCGATGCTTTGGTATCTGTGTCATCTGACGAGGATATACAGAATATGATGGAAGAATGTAATCATCAAGAAGATAGAGAAGGATCAGAAAAACTTAGGATGTTTTTGTTCTCGATCAGGGATTTGGAGGATGCTCAGTATGGTCTCGGCTGCACAAGTGACGATTCTGAAATCCAATATGTTATTGCTGTTAATGGCATGGACTTGGAATCAACAAAAAACTCAACCATGGTTGGTTTCAGCTATTCTGCAAACGATATAAATGAATTGGACAGGCAAAATATTAACAGTGAGGCTAATGACAATGCTCCCCTGTCACACAATTTTGACTCGTCATTTGGTACTCATTTTTCACAACCAATGCTACCAACTTCCTCAAATTCATACGAAATGTATCCAATGTTTTATGGTGATCAAATGATGCGTCATGGTGAACCTAACGGTCATGATCAATATCATATGCATCCTGGTGTTGTTAATCCTTCTTATAAACCTCTTTTTGAAGAGACTCCTATTAATATGCTTCCTCATATGCCAAATATTCAACGAGGGGTTTTAAATGAAGGCTATCTGCCTAGTGGATTACAGGTACAAAATGCAGAAATACCAGAAACTTTGGTGAGAATGATGGCCAATAGTTCAATTCAACAAGAAACAATATCTCCGTCTCCTTCCCAACTGTTTGATGGTTACTCAAAAAATGATATTCCCGAAGCAACGGTTACAGTTACTGCCGCAGAGGGATATTCATTGCCTCCAACAAGAACGAACCAGCTCCAGGATCACGATGAGGCTTCTTCTACTTCCAGCAATGCATTTGGTGCTGGTCCTTATGTTGATTCCCGCTCCAATGCTGTTGACTTGAGTAGTCTTCACCCTCCCCCTCTTCCTAGAAGAGTTTATTATTCAGAAAGAATTCCAAGGGAGCAAGTAGAGTCGCTGAACCGTTCCTCAAAGTCGGATGATGCGCACAACTCTCAGTTTCACGTTTCAGATTTACTTTCTGGTGACAACTCGCAGAATTCAGTTATAGACTCTGGTAACAACTTGCATGATGGAAATCTGTCTAATCTTGCTGAGGAACCGAGCATCACAGCAAAGCCCTTGCATGCAGATGGCGAAGGAAACAAAGATATCTTAAATAAGGACAATGCTGTTATGTTGGAAACAGAAAATTATCGTAATGATAACCATGAAAAATCCCTACTTGAAGGTAAATCAGACATCCCTTTGAAAGAGTCAAACAATGATTTTAACGTGCAAGCACCTATTCCTTTGACTGCGAAAGTTGATTCAGAAGCACCAGGTGACATTCTTATTGATATTAATGATCGATTCCCTCGTGAATTGCTTAATGATATGTTCTCAAAAGCAATACTAGAAGAAGATTCCTCTAGTCAACCTCCATTAGCTTCAGATGGAATGGGTTTAAGTATTAACATGGAAAATCATGAACCTAAAAGTTGgtcatattttcaaaaattggcGCAAGATGGGATCGGTAACGCGTCTCTTATTGACCAGGATCATCTTGGTTTTTCACCTGATATAGCTGGAGATAATAGAACTGAACATGTTACACCTTTAACAACTGATGAAGTTCCTCTAAACCGTGCAGAATTCCATCTCAATTTTGGTGAAGAAATGCAGAAAGACTTGCATGGAGAAAATGGAACTGAAACTACTGTTCTGCAATCAAATTATGATCAGTCACAAATTAATGACACAGAAAGTATGCAATTTGATGCTATGTTGGACAACCTAAGAGCACAAGATTCAGAATATGAGGATGGGaagtttgaaaagaaaaataacagtCTACCTCCTCTTGATCCTTCTTTAGGAGAATTTGATATGAGTACCTTGCAGGTAATAATGAATGAGGATCTTGAAGAGCTAAAAGAACTAGGTTCTGGTACCTTTGGGACTGTATATCATGGAAAGTGGCGAGGAACAGATGTTGCCATTAAGAGAATAAAGAAAACATGCTTCACTGGTCGGTCATCTGAGCAAGAGAGACTGACTGTTGAGTTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTTGTGGCATTTTATGGTGTGGTGCAGGATGGACCAGGAGGAACAATGGCAACCGTTACAGAGTATATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTCGATCGTCGCAAGAGACTGATAATTGCGATGGATGCAGCTTTTGGAATGGAATATTTGCACTCGAAAAATATCGTGCATTTCGACTTAAAATGTGACAATTTACTTGTAAACTTAAAAGATCCATTACGGCCAATATGCAAGGTTGGTGATTTTGGTTTGTCAAAAATTAAACGAAATACTTTGGTTTCTGGTGGAGTGCGAGGCACCCTACCTTGGATGGCACCAGAGCTGCTCAATGGTAGCAGCAGCAAGGTCTCAGAAAAGGTGGATGTGTTCTCCTTTGGCATAGTACTATGGGAGATTCTTACTGGTGAGGAGCCATATGCCAATATGCACTACGGTGCAATCATAGGTGGAATTGTTAACAACACACTAAGACCAACAATCCCAAATTATTGTGATATTGAATGGCGAACACTGATGGAGCAGTGTTGGGCACCAAATCCTGCAGTTAGGCCATCCTTCACAGAAATAGCGAGCCGATTGCGCATTATGTCTACGGCAGCTAGCCAAACCAAATCACCGGGACACAAGGCATCCAAATGA 3378 0.4023 MEPRNEYQPGLPSVTHDHMDDIYSSRRTHDLNTAEVKPVQHYSIQTGEEFALEFMRDRANLGKPVFPNVGDPNYATGYMELKGILGISHTGSETGSDISMLSMMEKYPKEFDRSQYGSIRSIPRSSLNQDNRQFVHGYSSSESYDNSSIMMKFLCSYGGRILPRPRDGKLRYVGGQTRILRIRKDISYHELIQKALVIYNQVHTIKYQLPGEDLDALVSVSSDEDIQNMMEECNHQEDREGSEKLRMFLFSIRDLEDAQYGLGCTSDDSEIQYVIAVNGMDLESTKNSTMVGFSYSANDINELDRQNINSEANDNAPLSHNFDSSFGTHFSQPMLPTSSNSYEMYPMFYGDQMMRHGEPNGHDQYHMHPGVVNPSYKPLFEETPINMLPHMPNIQRGVLNEGYLPSGLQVQNAEIPETLVRMMANSSIQQETISPSPSQLFDGYSKNDIPEATVTVTAAEGYSLPPTRTNQLQDHDEASSTSSNAFGAGPYVDSRSNAVDLSSLHPPPLPRRVYYSERIPREQVESLNRSSKSDDAHNSQFHVSDLLSGDNSQNSVIDSGNNLHDGNLSNLAEEPSITAKPLHADGEGNKDILNKDNAVMLETENYRNDNHEKSLLEGKSDIPLKESNNDFNVQAPIPLTAKVDSEAPGDILIDINDRFPRELLNDMFSKAILEEDSSSQPPLASDGMGLSINMENHEPKSWSYFQKLAQDGIGNASLIDQDHLGFSPDIAGDNRTEHVTPLTTDEVPLNRAEFHLNFGEEMQKDLHGENGTETTVLQSNYDQSQINDTESMQFDAMLDNLRAQDSEYEDGKFEKKNNSLPPLDPSLGEFDMSTLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKTCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNYCDIEWRTLMEQCWAPNPAVRPSFTEIASRLRIMSTAASQTKSPGHKASK 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03809 1125 ProSiteProfiles Protein kinase domain profile. 843 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03809 1125 Gene3D - 169 251 - -
Tsu02g03809 1125 MobiDBLite consensus disorder prediction 457 517 - -
Tsu02g03809 1125 SMART serkin_6 843 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03809 1125 ProSitePatterns Protein kinases ATP-binding region signature. 849 874 IPR017441 GO:0005524
Tsu02g03809 1125 CDD PB1_UP2 154 250 - -
Tsu02g03809 1125 CDD STKc_MAP3K-like 849 1106 - -
Tsu02g03809 1125 Gene3D Phosphorylase Kinase; domain 1 836 930 - -
Tsu02g03809 1125 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 623 1125 - -
Tsu02g03809 1125 MobiDBLite consensus disorder prediction 544 569 - -
Tsu02g03809 1125 Pfam Protein tyrosine and serine/threonine kinase 844 1106 IPR001245 GO:0004672|GO:0006468
Tsu02g03809 1125 Gene3D Transferase(Phosphotransferase) domain 1 931 1124 - -
Tsu02g03809 1125 PANTHER SERINE-THREONINE PROTEIN KINASE 623 1125 - -
Tsu02g03809 1125 SUPERFAMILY Protein kinase-like (PK-like) 832 1106 IPR011009 -
Tsu02g03809 1125 PRINTS Tyrosine kinase catalytic domain signature 1033 1055 IPR001245 GO:0004672|GO:0006468
Tsu02g03809 1125 PRINTS Tyrosine kinase catalytic domain signature 962 980 IPR001245 GO:0004672|GO:0006468
Tsu02g03809 1125 PRINTS Tyrosine kinase catalytic domain signature 925 938 IPR001245 GO:0004672|GO:0006468
Tsu02g03809 1125 PRINTS Tyrosine kinase catalytic domain signature 1077 1099 IPR001245 GO:0004672|GO:0006468
Tsu02g03809 1125 MobiDBLite consensus disorder prediction 460 501 - -
Tsu02g03809 1125 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 105 593 - -
Tsu02g03809 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 968 980 IPR008271 GO:0004672|GO:0006468
Tsu02g03809 1125 SUPERFAMILY CAD & PB1 domains 167 254 - -
Tsu02g03809 1125 SMART PB1_new 165 252 IPR000270 GO:0005515
Tsu02g03809 1125 PANTHER SERINE-THREONINE PROTEIN KINASE 105 593 - -
Tsu02g03809 1125 Pfam PB1 domain 166 250 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03809 Tsu-Chr2 43493950 43502229 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03809 32 1125 MAP Kinase Kinase Kinase AT1G16270 49.456 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Tsu02g03809 PK_Tyr_Ser-Thr 3.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03809 - - gmx:100801946 1593.56