Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03807 ATGCAGAAACATCAATACAATTCCATGGAACCTCGAAATGAGGAATACCATTCTGCACCACAACCGGTCCTGCAAGACCATCTGGAGGGCATGCATACCAATACAAGGCCTCCTCCTTCATTCAACATGCCAGAAAATAAACCTGTACATAATTTCTCCATACAGACCGGTGAGGAATTCGCTCTCGAGTTTATGAGGGATAGGGTGAATGTCAAGAAGCCTTCATTTCCAAATGTTGTCAGCGAACCTAATTATGCGACAGGGTATATGGAATTGAAAGGAATTTTAGGTCATCCAGGATCTGAAAGTGGTTCCGATATTTCTATGCTTGCAAATATTGAAAATGTTCCCAAAGAGTTTGACAGAAGGAATTCTGTTCTACATCAGGAAAGAAGTAATTATGGTTCGGCTCGATCAATTCCTAGATCGTCGTCTAATCAAGACAATAACCGAGTCCTTCACGGTATTCCCTCTTCTGGAGGTTCTGACAGCTTAtcattgaagatgaagattctATGCAGCTTTGGTGGCAGAATATTACCACGGCCGAGTGACGGAAAGCTTAGATATGTCGGTGGTGAAACACGGATTATTAGTATAAGAAAGGACATAAGTTGGCCAGAACTTTTGCAGAAAATATCAGCAATCTATAATGATACTCATGCAATAAAGTATCAGCTTCCTGGAGAAGATCTTGACGCCCTAGTTTCAGTATCTTCTGATGAGGATCTTCGGAATATGATGGAGGAATGTCATGACCTACAAAGAGGTAGAGGATCCTTGAAGCTTAGGATGTTCCTATTCTCGATGAATGATTTGGACGAGAGTCAGTTTGGTCTAGGTAGCATGGATGGTGGTGATTCTGAAATCCAATATGTAGTTGCTATTAATGGCATGGGCATGGAATCAAGAAGCAACTCTATCCTTCGTTGTGCTGGAAGTTCTAATAGTATACACGAGCTAGACAGACAAAATATTGACAAGGAGACTAAACGAGCTGTGGTAGAATCATATGGTGTCGGCAGTTCTTCCTTGACTGGCAATGTTAACTCGGTATTGACAAATCAGTCTTCCCAACCAATGATACCAACACCCTCAAATGCTTATGAAGCCTATCCGTTCTTTTACGAGGATCCGATCATTCAACAAGGGGGAACTAGTCAATATCCAATACACAATGGCCCTTTTCCTTCTAGCAGTTTGGCTCGCAATCTTGGAGAGGTTCCGGTTTCTTTGCCTACTCATGGTCTTGTGAACCAAGGAATCGTGAGCGAAGGACAAGCATCCAGTGAGTTCCAAGTACAAAGAAAAGGTGATAATGTCATTCATACAGCGAATGATCGAGGAAAAGTTTTATCAATAGAAGCACCATATTCTCTtccttcacatccatttgaggGAAGTTTGCAAGGTAATTTATCAGAGGCACCAGTTCCAGCAGCTGTATCAGAAGCACTCCATCCTGCACTGCCATTAGAAAACAAGATTCCAGCTGTTGTATCAGAAGCTCTGAATCCACAGATTTCAAGATTCGGTGAAGATGACTTCTATACTGCATCCGCAGATGCATTCAGTCGTGCTCTTGTTGATGCCGAGTCCAATGTAATTGATTTCAGTTGCCTTGAACCACCGCCACTTCCTAATAGAGTCTATTATTCAGAGAGAGTTTTTCCTAGGGAGCAGGCAGATTTGCTGAATCGGTCCGCAAAGTCAGATGATGCATATGGTTCTCACTTACTCATGTCAGATTTACTTTCTGATTTGAACCATATGAATTCAGTTAATGAATCCAGCGACATGTTGCACAACGAGAATCTGTCGAATCTGAATACAGCGTCGAACTCATCAGCAAAGCCCTTGCGTGCAGATAGCCATATCATCAACAAACATTTGCCTGATGCAACCAGTCAGGCAAACTCAAAGTTATATCAGCTTGTGGATTCTGATTTGAAGCGGGTATTATCAGATAACAAAATTTCTGAAAATGAGACAAATGTCTCCAAAGATAGTCCTAAAGTTCTTCAAGTTGATGAAACCAAGGGCACTGAGCGTCTTCCATTTCGCCGAGTTCCTTCTGTTGAACAAAATGTGAATCTAGCATCTAAACTTCAAGATAACAATTTGTCCGAGGTTCCTACAAGGGAACCTCTTGATGCTAAATCCAAACCATCTCAGGGTGACATTCTGATCGACATTGAAGACAGGTTTCCACGTGATTTCCTTTATGATATGTTCTCGAAAGCAGCTCATTCTGAAGATTCCGCAAACATTAGTCCATTACCAGCTGATAGAGCCGGTTTGAGCTTAAAAATGGACAATCATGAGCCTAAAAGTTGGTCATATTTTCAGAAGTTAGCTCACGAGGGGTTCGATAATAATGTTTCTCTAATTGATCAGGATAATCTCGGTTTTTCATCTGCAATAAGTAAAGCAAAAGAAGGGGATAGTATGTTACAGCATTCCGCTCCTCTACCTGCAGAGAGTGTTATTCTGACAGGACCCATGGAATCCCATTCCCACCTAAATTTTGGAGATGAAAATCAGAAAATTTTACCTGCAACCACTAAAACCGAGGCTGTTGTTTTTCAACCAGAAAATAACCCTTCTGTACTTGAGGGAAATGAAAATAAGAACGTCAGCACCACAGTGGAAAACATAAGAACACCGGAGTATGAATATCAGGATGACAATAGTGAGACAAGGGATGTCGTTGTCGCTCCAGATACTATTTTTGGGGAGTTTGATATTAGTACTTTGCAGATCATAATGAATGCGGATCTTGAAGAGCTGAGAGAGCTCGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGCGGGGATCAGATGTtgcaattaaaagaataaagaaaagttGTTTCTCCGGCCGGTCTTCAGAACAAGAAAGACTGACCATAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCAAGATGGACCAGGAGGTACAATGGCCACTGTTACTGAGTTCATGGTTGATGGTTCTCTCCGTCATGTGTTGCTACGTAAGGATCGGTATCTTGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTCGGAATGGAGTATTTACACgcaaaaaatattgttcatTTTGACTTGAAATGTGACAATTTGCTTGTGAACATGAAGGATCCTTTAAGGCCAATATGCAAGGTTGGCGATTTTGGCCTGTCAAAAATTAAGAGGAATACCCTGGTGACTGGTGGTGTGCGTGGAACTCTACCTTGGATGGCACCAGAGCTGCTGAATGGGAGCAGCAATAAGGTTTCAGAAAAGGTTGATGTATTCTCCTTTGGAATTGTATTATGGGAGATTCTTACTGGGGAGGAGCCATATGCTAATATGCACTATGGTGCAATCATAGGAGGTATTGTGAACAACACATTAAGACCAACAATCCCCGGTTATTGCGATCTAGAATGGAGAACACTAATGGAGCAGTGTTGGGCACCTAATCCTGCAGTCAGACCATCCTTTACAGAAATTGCACGCCGCTTGCGTGTGATGTCTGCGGCAGCTATTCAGACCAAAGGACAAGGACATAAGGCATCTAAATGA 3630 0.4143 MQKHQYNSMEPRNEEYHSAPQPVLQDHLEGMHTNTRPPPSFNMPENKPVHNFSIQTGEEFALEFMRDRVNVKKPSFPNVVSEPNYATGYMELKGILGHPGSESGSDISMLANIENVPKEFDRRNSVLHQERSNYGSARSIPRSSSNQDNNRVLHGIPSSGGSDSLSLKMKILCSFGGRILPRPSDGKLRYVGGETRIISIRKDISWPELLQKISAIYNDTHAIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQRGRGSLKLRMFLFSMNDLDESQFGLGSMDGGDSEIQYVVAINGMGMESRSNSILRCAGSSNSIHELDRQNIDKETKRAVVESYGVGSSSLTGNVNSVLTNQSSQPMIPTPSNAYEAYPFFYEDPIIQQGGTSQYPIHNGPFPSSSLARNLGEVPVSLPTHGLVNQGIVSEGQASSEFQVQRKGDNVIHTANDRGKVLSIEAPYSLPSHPFEGSLQGNLSEAPVPAAVSEALHPALPLENKIPAVVSEALNPQISRFGEDDFYTASADAFSRALVDAESNVIDFSCLEPPPLPNRVYYSERVFPREQADLLNRSAKSDDAYGSHLLMSDLLSDLNHMNSVNESSDMLHNENLSNLNTASNSSAKPLRADSHIINKHLPDATSQANSKLYQLVDSDLKRVLSDNKISENETNVSKDSPKVLQVDETKGTERLPFRRVPSVEQNVNLASKLQDNNLSEVPTREPLDAKSKPSQGDILIDIEDRFPRDFLYDMFSKAAHSEDSANISPLPADRAGLSLKMDNHEPKSWSYFQKLAHEGFDNNVSLIDQDNLGFSSAISKAKEGDSMLQHSAPLPAESVILTGPMESHSHLNFGDENQKILPATTKTEAVVFQPENNPSVLEGNENKNVSTTVENIRTPEYEYQDDNSETRDVVVAPDTIFGEFDISTLQIIMNADLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFSGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNMKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGYCDLEWRTLMEQCWAPNPAVRPSFTEIARRLRVMSAAAIQTKGQGHKASK 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03807 1209 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 83 1209 - -
Tsu02g03807 1209 Gene3D Transferase(Phosphotransferase) domain 1 1015 1209 - -
Tsu02g03807 1209 ProSiteProfiles Protein kinase domain profile. 927 1192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03807 1209 PANTHER SERINE-THREONINE PROTEIN KINASE 83 1209 - -
Tsu02g03807 1209 Gene3D Phosphorylase Kinase; domain 1 921 1014 - -
Tsu02g03807 1209 Gene3D - 187 269 - -
Tsu02g03807 1209 CDD STKc_MAP3K-like 933 1190 - -
Tsu02g03807 1209 SUPERFAMILY Protein kinase-like (PK-like) 918 1189 IPR011009 -
Tsu02g03807 1209 SUPERFAMILY CAD & PB1 domains 184 275 - -
Tsu02g03807 1209 Pfam PB1 domain 185 268 IPR000270 GO:0005515
Tsu02g03807 1209 Pfam Protein tyrosine and serine/threonine kinase 928 1190 IPR001245 GO:0004672|GO:0006468
Tsu02g03807 1209 PRINTS Tyrosine kinase catalytic domain signature 1009 1022 IPR001245 GO:0004672|GO:0006468
Tsu02g03807 1209 PRINTS Tyrosine kinase catalytic domain signature 1161 1183 IPR001245 GO:0004672|GO:0006468
Tsu02g03807 1209 PRINTS Tyrosine kinase catalytic domain signature 1046 1064 IPR001245 GO:0004672|GO:0006468
Tsu02g03807 1209 PRINTS Tyrosine kinase catalytic domain signature 1117 1139 IPR001245 GO:0004672|GO:0006468
Tsu02g03807 1209 ProSitePatterns Protein kinases ATP-binding region signature. 933 958 IPR017441 GO:0005524
Tsu02g03807 1209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1052 1064 IPR008271 GO:0004672|GO:0006468
Tsu02g03807 1209 CDD PB1_UP2 172 268 - -
Tsu02g03807 1209 MobiDBLite consensus disorder prediction 129 162 - -
Tsu02g03807 1209 SMART serkin_6 927 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03807 1209 SMART PB1_new 183 268 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03807 Tsu-Chr2 43459307 43466540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03807 5 420 MAP Kinase Kinase Kinase AT1G16270 44.111 1.15e-77 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Tsu02g03807 PK_Tyr_Ser-Thr 9.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03807 - - cam:101510527 1951.02