Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03779 ATGGTTTGTAAGGAGAAGGAAAAGGTTGATGCCAAGTTCAATGATATTGTTGAAATTGATGCTGGTAAAAAAGTTTTGCGTATTAAGGCGAGGGTGATTCGTTTGTGGAAAGTTCCTCAATTTAGCAATCCATCTGAATTTAGTTCACTTGAGATGGTTTTGCTTGATGAGAAGCTTAAGACAAAGGTCAGGCCATCTGAGAGTTCTGCTATACCTGAGCTTGGGTTGAGTTTCACTATTTTTCATGAAATTAATTCTCATACTCATGATTATGAGTTCCTTGTTGATGTCATTGGTGTGATGACTGGGATGTCAGCTGAAAGAGAGTATTTAAGGGATGACAAGATTACTAAAATGGTTATAATTGAGTTAAGTGATCACACGGGTAAGTGTGAGTGTGCATTGTTTGGTGATTATGCTGATGATTTGGTGAAGAAGATGGGAAAATCGACCTCTGGTTTACCTATTGTTTTTATCCAATTTGCCAAAGAGAAGATTTTCAGGgACAAGACATCTATTCAAAATGTGATAAACACTACCAGGATACTCATTAATCCAGATATTCCAGATGTTGAGTCATTTAAGAATAGTGATAACAGTGTTCCATTGATTGGAGATCGTGGGAAGCCTTATGTTGAGGAAGAATTCCTTCGGAATGTTGATATCGAGTTTGATCATGTTGCTGATATATTGCCCGGTAAAGAAAATGTTCCAATCAAGGTTAGGGTGATTCATTTGTGGAAGGTCCCTGCTTTCCTCAATCCATCTGAGTCTAGCTCTCTTGAGATGGTTTTGATTGATGAGAAGGTGGTTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAATATAAATACTGAAGATCCCGTGTTATGGGAACTGGTACATTGCACCAGAGTATCTTGA 906 0.3808 MVCKEKEKVDAKFNDIVEIDAGKKVLRIKARVIRLWKVPQFSNPSEFSSLEMVLLDEKLKTKVRPSESSAIPELGLSFTIFHEINSHTHDYEFLVDVIGVMTGMSAEREYLRDDKITKMVIIELSDHTGKCECALFGDYADDLVKKMGKSTSGLPIVFIQFAKEKIFRDKTSIQNVINTTRILINPDIPDVESFKNSDNSVPLIGDRGKPYVEEEFLRNVDIEFDHVADILPGKENVPIKVRVIHLWKVPAFLNPSESSSLEMVLIDEKVVDFGLARWQSEWNINTEDPVLWELVHCTRVS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03779 301 PANTHER REPLICATION FACTOR A 1, RFA1 28 219 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Tsu02g03779 301 Gene3D - 11 66 IPR012340 -
Tsu02g03779 301 Gene3D - 70 201 IPR012340 -
Tsu02g03779 301 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 28 219 - -
Tsu02g03779 301 SUPERFAMILY Nucleic acid-binding proteins 77 199 IPR012340 -
Tsu02g03779 301 CDD RPA1_DBD_B_like 96 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03779 Tsu-Chr2 42887351 42892262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03779 53 195 Core DNA Replication Machinery Family AT2G06510 25.170 3.65e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03779 - - mtr:MTR_1g075850 192.586