Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03771 ATGCATAAATTGGGGAGAGGTCATCGTGATAAACTCCAGCAGTTTGTAACGATAACCGGAGCTAGCGAGAAAGTAGCAATGCAGGCTCTGAAGGCTAGTGATTGGAATCTTGAAGGAgcatttgattatttttatagcCAGCCTCAGCTTAGAACCGTCACTGATTCAAGACACTTGGAGGAGCTATACAATAGATATAAAGATAAATACATTGATATGATTTTTGCAGACGGCATCACTCTCCTTTGCAATGATATCCAGGTGGATCCTCAAGACATAGTAATGTTAGTTCTTTCGTGGCACATGAAGGCCAGCACAATGTGCGAATTTTCCAAGAAGGAGTTCACTGAAGGCTTACAATCTTTGGGGATTGATTCGCTGGAAAAGTTCCGTGAAAAGATACCATCCATGCGCGCTGAGCTGAAAGATGAACAAAAATTTCGTGAGATATATAACTTTGCTTTTGGCTGGGCAAAAGAGAAGGGTCAAAAATCTCTGGCTTTGGATACAGCTATTGGAATGTGGCAATTATTATTTGCGGAGAAGCAGTGGCCACTGGTTGATCATTGGTGCGAATTCCTGCAGGCTCGGCATAACAAAGCAATATCTAGGGATACATGGTCTCAACTATTGGAGTTTGCAAAGACTGTTAGCTCAAATTTATCTGATTATGATGCTGAAGGTGCTTGGCCGTATCTTATTGATGAGTTTGTCGATTATCTGAAAGAGAACGGTGTTAACCAACATGGTCAGATCAATGATTCTACTCTAAATTGA 777 0.4041 MHKLGRGHRDKLQQFVTITGASEKVAMQALKASDWNLEGAFDYFYSQPQLRTVTDSRHLEELYNRYKDKYIDMIFADGITLLCNDIQVDPQDIVMLVLSWHMKASTMCEFSKKEFTEGLQSLGIDSLEKFREKIPSMRAELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCEFLQARHNKAISRDTWSQLLEFAKTVSSNLSDYDAEGAWPYLIDEFVDYLKENGVNQHGQINDSTLN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03771 258 Gene3D - 52 142 - -
Tsu02g03771 258 Gene3D - 6 47 - -
Tsu02g03771 258 Gene3D Cullin, PONY binding domain 143 251 IPR042460 -
Tsu02g03771 258 Pfam UBA-like domain 9 47 - -
Tsu02g03771 258 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Tsu02g03771 258 PANTHER RP42 RELATED 13 249 IPR014764 -
Tsu02g03771 258 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Tsu02g03771 258 CDD UBA_DCNL 8 48 - -
Tsu02g03771 258 Pfam Cullin binding 130 240 IPR005176 -
Tsu02g03771 258 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 13 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03771 Tsu-Chr2 42736547 42745260 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03771 K17822 - gmx:100527072 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03771 02 42736547 42745260 Tsu02g03771 02 42736547 42745260 ECH