Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03742 atgaagacaCTATACATTGTTGGAACAAACCTTATTAATTTACCATTTTGCCACTCTTCTCAATTCCTTTCTCCAAACCCAAATGTCCCATTACTTATTCATTTCCCTTCCAAACAGATTCCAAAGTTAACTCCAAAACCTTATTCCATTTCCTTCAAAAAATCTCACTTTTCTCCAATTAAAGCTTCAATGGCTTCATCAACTGTCACAGACACAAACAAACCATTCTCAGTTCTCTTTGTATGTCTTGGAAACATTTGTAGAAGTCCAGCTGCTGAAGGAGTTTTTACTGATTTGGTTAAGAAAAGAGGTTTTGATTCTAAGTTCAGAATTGATTCTGCTGGTACAATCAATTATCATGAAggtaaTCAAGCTGATTCAAGAATGAGGGCAGCTTCAAAAAGACGTGGGATTGAGATAACTTCAATTTCAAGGCCTATTAAGTCTTCTGATTTTGTTGAGTTTGATCTCATTCTTGCTATGGACAAGCAAAATAGAGagGACATATTGGAAGCTTTTAATAGATGGAAGTTTAGAGATCCTTTACCTGAAAATGCTCACAAAAAGGTTAAGTTGATGTGCTCATATTGTAAGAAGCATGATGAAACTGAAGTCCCAGATCCTTACTATGGTGGACCTCAAGGTTTTGAGAAGGTATAG 660 0.3485 MKTLYIVGTNLINLPFCHSSQFLSPNPNVPLLIHFPSKQIPKLTPKPYSISFKKSHFSPIKASMASSTVTDTNKPFSVLFVCLGNICRSPAAEGVFTDLVKKRGFDSKFRIDSAGTINYHEGNQADSRMRAASKRRGIEITSISRPIKSSDFVEFDLILAMDKQNREDILEAFNRWKFRDPLPENAHKKVKLMCSYCKKHDETEVPDPYYGGPQGFEKV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03742 219 PRINTS LMW phosphotyrosine protein phosphatase signature 121 137 IPR017867 GO:0004725|GO:0006470
Tsu02g03742 219 PRINTS LMW phosphotyrosine protein phosphatase signature 205 219 IPR017867 GO:0004725|GO:0006470
Tsu02g03742 219 PRINTS LMW phosphotyrosine protein phosphatase signature 78 95 IPR017867 GO:0004725|GO:0006470
Tsu02g03742 219 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 41 219 - -
Tsu02g03742 219 Pfam Low molecular weight phosphotyrosine protein phosphatase 78 219 IPR023485 -
Tsu02g03742 219 CDD LMWPTP 77 219 - -
Tsu02g03742 219 Gene3D - 60 219 - -
Tsu02g03742 219 SMART LMWPc_2 76 219 IPR023485 -
Tsu02g03742 219 SUPERFAMILY Phosphotyrosine protein phosphatases I 74 219 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03742 14 219 Protein tyrosine phosphatase (PTP) family AT3G44620 56.780 6.52e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03742 K25307 - gmx:100797254 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03742 02 42293561 42296815 Tsu02g03742 02 42293561 42296815 ECH