Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03736 ATGGAAAATCACAAGACACCCTTTTCCTTATGTCTTGATACCAAGGATGTTGTGATTGTTAAACCCTCCAAGCCCACACCTTCTGAAATTCTTTCACTCTCTACCATTGACAATGATCCTAACATCAACATTCTATGTCAAACAATTTATGTCTACAAAGCAAATCATGATTTCACAAATGACCAAAAAGACCCTGCTTGTGTAATCAAAGAAGCACTCTCAAATGCTTTAGTTTACTATTATCCTCTTGCAGGCAAGATAACAACACTTGATGATGGAAAACTTGGAATCAACTGCAACGGCGACGGAGTTCCATTCTTAGAATCAAATGCTAATTGTGAACTCTCTTCTCTTCATTATCTTGAAGGGATTGATGTTCCAACAGCACAAAAACTTGTGTTTGATAATCCTTCTCAAGACCAAACTAGTCCTCATCCTTTGGTTTTTAAGGTGACAAAGTTTCTTTGTGGTGGTTTCACAATTGGAATGGGATTGTCACATAGTGTTTGTGATGGTTTTGGTGCATCAAAATTCTATAGAGCACTTGCTGAACTTGCAAGTGGAAAAAATGAACCTTCTTTGAAACCTGTttgggagagagagagattaataGGGAAAAGTGATTTTAAGGAAGAACCATTCAAATTTCTTATAGATAAAACTTCATTAGCAACTTCACCTTTTTTACCAACAAAAGAAATTTCACATGAATGTTTTAGCTTAAATGGTGACActataaaaattctaaaaatgaaactAATGAAGGAAAGTGGtgatgataatatgatgaaagAAAGTTTTACAACACTTGAAACACTTGGTGCATATGTTTGGAGATCAAAGGTTAGAGCTTTGAAATTGAACAATGATGGAAAAACAATGTTTTGTTTAGCAATAGGTGTGAGAAAACTATTGGATCCACCTTTGCATGAAGGGTATTATGGTAATGCTTTTGTAGCTTCAAATGTTGTGTTAAAAGTGAAAGAGCTTAATGAAAAACCACTTTTTGAAGTTGTGAAGCTTATCAAAGAGAGTAAAAAACTTGCTTTAAATAATGAATAcataagaaattcaattaatatGTTGGAAACAATGAGGAAAGGGAAGATTAAGATTGAAGGAACAGGTGCATCATTGGTTTTAACTGATTGGAGACAACTTGGTTTGTTGCAAGAAGTTGATTTCGGATGGAAGAGTTCAGTGAATATTGTGCCTGTTCCTTGGAACATGTTTGGTTTTGTGGATTTGTGTCTTTTTTTGCCTCCAAGTAACTTGAATCCTTCAATGAAAGGTGGAGTTAGGATCTTTGTGTCACTTCCAAAAGCTTCAATGGCTAAGTTCAAGGAGGAGATGGAGTTCCTTAAGGTCACGAAAGTTGATGAAGATACATAG 1392 0.3355 MENHKTPFSLCLDTKDVVIVKPSKPTPSEILSLSTIDNDPNINILCQTIYVYKANHDFTNDQKDPACVIKEALSNALVYYYPLAGKITTLDDGKLGINCNGDGVPFLESNANCELSSLHYLEGIDVPTAQKLVFDNPSQDQTSPHPLVFKVTKFLCGGFTIGMGLSHSVCDGFGASKFYRALAELASGKNEPSLKPVWERERLIGKSDFKEEPFKFLIDKTSLATSPFLPTKEISHECFSLNGDTIKILKMKLMKESGDDNMMKESFTTLETLGAYVWRSKVRALKLNNDGKTMFCLAIGVRKLLDPPLHEGYYGNAFVASNVVLKVKELNEKPLFEVVKLIKESKKLALNNEYIRNSINMLETMRKGKIKIEGTGASLVLTDWRQLGLLQEVDFGWKSSVNIVPVPWNMFGFVDLCLFLPPSNLNPSMKGGVRIFVSLPKASMAKFKEEMEFLKVTKVDEDT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03736 463 Pfam Transferase family 15 453 - -
Tsu02g03736 463 PANTHER ACYL TRANSFERASE 4 4 455 - -
Tsu02g03736 463 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 455 - -
Tsu02g03736 463 Gene3D - 12 214 IPR023213 -
Tsu02g03736 463 Gene3D - 229 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03736 Tsu-Chr2 42260200 42261862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03736 12 449 Monolignol Biosynthesis Gene Families AT5G48930 27.313 2.87e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03736 K20240 - gmx:100801843 705.671