Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03722 ATGGACACACCAATGGAGTTTTGGGGTACTGAGGTTAAAGTTGGACAATCTGTTAAAGTTGATCCAAATGATGAAGAAAATCAGGGATATATCCACATTTCTCAGATTGCACTTGGGGAAGCGAAGAAAGGCAAAGCAACTGAACCTGTTGTTGTGTATGTGAAAGTTGGGGAGCAGAAGCTTGTTCTAGGAACACTTATTCAGGATGCCATTCCTCACATATCTTTGGATATAGTTCTAGACAGTGAGGCTGAACTTTCCCACAATTCAAAAAATGCTGCTGTCTATTTTTCTGGATACAAAGTTCCTGGTGACAACAACGAAGATGATGAAGACGCTGACCTTTCTGATAGTGATGCTGAACTTGCTCCTATTAAGGATCGTGTTGAAGCTGCAAAGGAGCTTGTTAAATCGGGAAAACCTACTGCTGAAACTGGTGCAGTGGCAAGGCAAGTGAAGATTGTTGATCCAACAGAAGTTAAAGAAGAATCTGATGATGAGTCAGATTCTGATTTTTCTGAGTTCAACTCTGATAGTGAGGATGGTGAAAGTGAAGAAGAGAGTCCCGCTAAGAAGGCGGATCAGGGCAAGAACAACAAGGGAACAAATGGGAATGCACCAAAAGCTCCAGTTCCTACCAAGAAAGCTAAAATTGCTACGCCCGAAAAGACTGATTCTGATGTTGATTCCAGTGATGAAGATATTAGTGATGAAGATATTAGCGATGAAGATATTAGTGATGAAGATTCTAGTGACGAAGAGACTCCTGTTCAGAAGGTAATCAACTGTTGTACAATGCAGTTATCTGTTTTGTTTTTACTATCTTATGATTCTATTATGTGCAGACTACACTAG 855 0.4035 MDTPMEFWGTEVKVGQSVKVDPNDEENQGYIHISQIALGEAKKGKATEPVVVYVKVGEQKLVLGTLIQDAIPHISLDIVLDSEAELSHNSKNAAVYFSGYKVPGDNNEDDEDADLSDSDAELAPIKDRVEAAKELVKSGKPTAETGAVARQVKIVDPTEVKEESDDESDSDFSEFNSDSEDGESEEESPAKKADQGKNNKGTNGNAPKAPVPTKKAKIATPEKTDSDVDSSDEDISDEDISDEDISDEDSSDEETPVQKVINCCTMQLSVLFLLSYDSIMCRLH 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03722 284 Gene3D Nucleoplasmin core domain 2 107 - -
Tsu02g03722 284 MobiDBLite consensus disorder prediction 147 256 - -
Tsu02g03722 284 MobiDBLite consensus disorder prediction 161 184 - -
Tsu02g03722 284 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 227 - -
Tsu02g03722 284 MobiDBLite consensus disorder prediction 227 251 - -
Tsu02g03722 284 Pfam Nucleoplasmin-like domain 7 101 IPR041232 -
Tsu02g03722 284 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03722 Tsu-Chr2 42093623 42098001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03722 5 168 C2H2 Transcription Factor Family AT5G03740 40.606 5.93e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03722 - - cam:101503096 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03722 02 42093623 42098001 Tsu02g03722 02 42093623 42098001 ECH
Tsu02g04673 02 55748887 55751981 Tsu02g03722 02 42093623 42098001 PCT