Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g03715 | ATGGAGAAAACTAATGGTAGATCGAGAGGTCGTCCTAAGAAACGAAGAAAGGAGGATGAAAAGGAAGGGAAAACGGTTGCTGATGCTAAAAGGCAACCGTTGGAGGTGGCCAAACCAATAGCATTGGTTGGCAGGTTTGTGTTGAAGGAGTTCCCGGAAAATGGGATTTTTCTCGGTAAAGTTGTCTACTACGACAGTGGATTGTACAGAGTGAATTATGAGGATGGCGACTTTGAAGATTTAGAGAGTGGCGAAATCCGTCCCGTACTTATCCGGGACGAGGATTTTGATGCTGGCTTGGTAAGGAGGAGGAGTAAATTAGAGAAGTTAGTGGCTAAGAAGAGTGCCAAGGTTGCGGATGTAGCTGACGAGGGGTTAGTTAAGTCTGGAAAAGAGGAATCTGCTACTGGTGTAACTTCTCTGAGTGAATTGAGTGGGGGACCATCAATTGACAATGACAAGGATGAAGATGATGGATTAGATGCTGATTTGGCTAGTGAGTCTGTTTCTAATGTTGAGACACTGCCTTTGCCGCCACTGTTGCAGTTGCCTCCTTCATCCGGAACAATTGGTGTGCCGGAGCCGAGTGTTTCCCACCTTTTTTCTGTGTATGGATTCTTAAGATCCTTCAGCACAAAATTGTTTCTTCATCCCTTTTCTTTGGATGAATTTGTTGGTTCCTTGAATTGTCAAGTCTCCAACACTTTGATTGATGCCATTCACTTTTCGCTAATGCGGGTGTTAAGGCATCATCTGGAAACATTGTCATCTGAGGGATCTGAGCTTGCATCCCAATGCCTTAGGTGCAATGATTGGAGCTTGCTTGATACATTGACTTGGTCCGTTTTTGTGATCCTCTATTTGGTGGTTAAAGGGTACACGAAAGGACCTGAATGGAAGGGGTTCTACGATGATGTTTTTAGCGGGGAATATTATTTGTTGCCTGTAAGTAGGAAGCTAATGATACTCCAAATTCTTTGTGACGATGTTTTGGAATCTGAGGAGCTAAAAACTGAAATGAACATGCGAAAGGAATCAGAGGTCGGTATGGATTATGATGCAGAAGATATCCTTCCTGCAGAAATGGGACCCAGAAAGGTTCATCCAAGATATGCCAGGACCTCTTTTTGTGAGGATAAAGAAGCTGTCAAATTGGTTTCAGCATCAAATGCTGTGAACCAACCTAGTAACTCTATTTCATATTGCAGAGATACAGAAAGCACTGGGGATGGGGATTTTGATAGAAATGGTGATGAATGTCGCCTCTGTGGTATGGATGGAACCCTTCTTTGTTGTGATGGGTGTCCCTCTGCTTATCATTCAAGGTGTATTGGTGTGATTAAAAGTTATATACCAGAAGGGCCATGGTATTGTCCAGAATGCAAAATCAATATGACTGGGCCCACAATTGCAAAGGGAACCTCGCTTAGAGGGGCTGAAATATTTGGAAAGGATTTGTATGGGCAGCTCTTCATGGGTACATGCGACCACTTGCTTGTGCTTAACATTGGCAACAATGAAGATTGTCTTAGATATTACAATCAGAAGGACATCCCTAAAGTTGTCCAACTGCTTTGTGAATCCACGCTGCATAGGTCAATGTACTATGGTATTTGCATGGCAGTGCTACAATACTGGAATGTTTCAGAAAACTTGTTACCTCTTCTTGCTTCAACTGAAACAAATATGAAGGATGAGACAGAAGTTTCTGCCCCTTTACTTCCTCCTCCAAGTGAAGACAACCATAAACCTGTTAGTTTGGTCAAGGGAGAGAATTCTCCAACCACTGCGAGTTTGATTCACAATGATAATATGGTGCCTTCTCTTGATGCTTTGCAAGTTAGCACTCAAAGTCCTGCTCTTCATAGCAGTGGCATTGCTACGAGTGAAGAGGGCCTTACTGTGGTTAATAACATTGCTGCGGAAACTAGGATAGAGGCAATAATTTCAGCTGGTTCTGTTAGCCATCAGTCTGACCTGAACTTGCAGAACTCTGTCAATATGTCAACTACAGTAGATGCTGCTAAGTGCTCTTTGGTGAAAAGTCAATTAAGTAATTGCGGCCATGCAAATGATATGGGGTTgcctttgaatttttctttgctAAACAAAGAAAACACCTCAGTAGGCTTTGGAAAGTGTGAAAACAATGCAAATGatgatttttgttattttggtttCTCCTATAAACCTTCATCATACATAAACTGCTATATGCATGGTGAATTTTCTGCATCAGCAGCTGCCAAATTTGCCATGATTTCTTCAGAGGAGTCTAGGTCAGAAGGTCATGCATCAGATAGCCATAAAAAAACTGTATCTGCATATACTTACTTGCAAGCAAAAGCATTCTCACTAGCAGCATCACGTTTCTTTTGGCCAAGTTCTGAAAAGAAGCCCGTGGAGGTTCCAAGAGAGAGGTGTGGTTGGTGCATTTCCTGTAAAGCCAATGTTGCTAGCAAGAGAGGGTGCATGTTAAATCATGCTCTTATAAGTGCCACAAAAAGTGCCATGAAAATCCTTCCTAAATTTTCTCCTTTAAGGAGTGGAGATGGAAGTTTTCCTAGCACCATTGCAACATACATTTTATATATTGAGAAATGTTTACATGGTTTAGTAGTTGGGCCCTTCATAAATGCAAGCTATAGAAACAACTGGCGTAAGCAAGTGGAACAGGCCACAACACTTGGTGCTCTCAAGCCACTTCTACTTAAAcTTGAGGAGAACATTAGAACCGTTGCTTTTTGTGGGGACTGGGTTAAGCTGATGGATGATCGGTTGGTTGAGTTTTCCATTATACAAAGTGGCACATCTACTCAAGGAACATCTCAGAAACGTGCACCAAGTGGGAGGCGTTATAAAAAGAGGTCATCTATTGATGAGGCTATAGATGATAGTTCCCAGGAAGGCATGTGGTGGCGCGGTGGCAAAGTTACCAAATTTATATTTCAGAATGTAGCTTTGCCAAAATCCATGGTCAGAAAAGCAGCTCGCCaagGTGGTTCGAGGAAAATTTCGGGTATTATCTATGCCGATGGCTCTGAAACTCCCAAAAGAAGTAGACAGCTTGTTTGGAGAGTCGCAGTTCAAATGAGTAGAAATGCCTCACAGCTGGCACTCCAGGTCAGATACCTAGATTATTATCTTAGATGGAGTGATCTGATTCGTCCAGAGCAGAACATACAGGATGGGAAAGGTCAAGAGACCGAAGCTTCTGCTTTCCGAAATGCGaatatttgtgataaaaaaCTCGTTGATGGAAAAATTTGTTATGGAATAGCTTTTGGGAGCCAAAAGCATCTTCCTAATAGGGTGATGAAAAGTGTTGTTGAAAAAGAGCAAATTTcagaaggaaaagaaaagtaTTGGTTTTCTGAAACTAGAATTCCTTTATATTTGGTAAAAGAGTATGAAGAAGGTAATGAAAAGGTTCCATGTCAAGAGCACTATAGTGGTGCATCTCCGTTGAACAGAAGGCGGTTGAAAGGTACCTGCAGTGACATACTCTTTTACCTTCGTTGCAAGAGAGACAACTTGGCATTCTCATGTTCTTCATGTCAGATGGGAATTTCAATCCGGAATGCTCACAAGTGTAATGCATGTCAAGGTTATTGTCACGAGGACTGTTCCATAAGTTCAGTTTCTATACTCTCTACAAATGGGGAAGTTGAGCGCTTGACCACATGCAAACAATGTCACCGTGCCAAGTTACTTGCTCCAAACATAATTAGTGATGAATCTCCAACCAGTCCTTTAATCTTACAAGGACAGGAAAACAGCTCTGGGACTATTTTCAAGGGACCTAGGCCAAAGGCTGGTCATTCTGACACGAAACAAGTTAATTCCATGTCAGTTTCAAAAGGATCGAAGCGTAAATGTCCTGATCAAACTGTGAGTTCTACCAGGAAAATAAAAGGTCATTCTGATGCCAAACAAGCTGTGTCTGATTCCACCAAAGTGGAATCAAGCAACCGTCGCAACAATAATTGTTCTTGGGGTCTTATATGGAAAAATAGAAGTAATGAAGAAAGCACTGATTTTAGGATAAACAACATACTTTTAAAGGGAGGATCAAACATGCCGGATCTATCTCCTGTTTGTAACTTATGTACAAAGGCATATAGGGATGATCTAATGTATATTCGCTGTGAGACATGCCAAAATTGGTTTCATGCTGAAGCTGTTGAACTTGAAGAATCCAAAATTTCGACTTTGTTGGGCTTCAAATGTTGCAAGTGTCGCAGGATAAAATCACCTGTGTGTCCGTACGCAGAGCCAAAACCTATGTCAGAAGTTAAGAAATCACGCAGACGAGCTTCAAAGAAAGAACAGTCTGGAGCCAATTCTGATTCCGGAACATTCAATGATATCAGAGATTCTGAACCTGATACTCCTGTCTTTCCTGTGGAGAGTGATCCTTTACTTTTTTCTCTTGCAAATGTTGAGCTGATTACAGAATCTAATAAATTAGATTTGGGTGTTCAGTGGAACACTGCCTCTGTGCCAGTGCCTCAGAAATTGCCAGTTAGAAGGCATGTTAAGCATGAGGGGGATGATGATGGTTCTGTTGCAGGAATTCCTTTACAGGCTGAATTTTCAGCACACTGTGAAGCAGGTTATCTGTCCAATCCTGCAGATTCGGAACTACCTTTAGAATACGACTCTGCTATTTTTGACAGCAATCTGCCGAACAACTATGAGTTTGGAAATGATCAATCTTTTGATGATGACAACAACAATCCCAATCTCTATTTCGATCCAAATGAACTGCTATGCACAGATGACGGCCAGATTGATGAAGGCCAGATTGATGAAGGCCTGATTAATGAAGGCCAGATTAATGAAGGCCAGATTAATGAAGGCCAGATTGATGGAGGTGATTTGTCTATGGATTTGTTGAAATATGATATCGAGAATTCTGGTGCCGCTGTTCCTGAAGAATTTGGAGACTTTGGAGATTTTGGagattttggagaatttgaacACAACGTTTATTGCAATATATGCTTACAAAATGTACCAGGTCTCGATCGTTTTTGTGAGACATGCGGAGTTTTGTGTCACAGCAGTTGTTTGCCTTGGCCTGAACCAGTTACTTATGTTGAAAAGTGGAAGTGTATGAATTGCCGGGATTGGCAATAA | 5142 | 0.41 | MEKTNGRSRGRPKKRRKEDEKEGKTVADAKRQPLEVAKPIALVGRFVLKEFPENGIFLGKVVYYDSGLYRVNYEDGDFEDLESGEIRPVLIRDEDFDAGLVRRRSKLEKLVAKKSAKVADVADEGLVKSGKEESATGVTSLSELSGGPSIDNDKDEDDGLDADLASESVSNVETLPLPPLLQLPPSSGTIGVPEPSVSHLFSVYGFLRSFSTKLFLHPFSLDEFVGSLNCQVSNTLIDAIHFSLMRVLRHHLETLSSEGSELASQCLRCNDWSLLDTLTWSVFVILYLVVKGYTKGPEWKGFYDDVFSGEYYLLPVSRKLMILQILCDDVLESEELKTEMNMRKESEVGMDYDAEDILPAEMGPRKVHPRYARTSFCEDKEAVKLVSASNAVNQPSNSISYCRDTESTGDGDFDRNGDECRLCGMDGTLLCCDGCPSAYHSRCIGVIKSYIPEGPWYCPECKINMTGPTIAKGTSLRGAEIFGKDLYGQLFMGTCDHLLVLNIGNNEDCLRYYNQKDIPKVVQLLCESTLHRSMYYGICMAVLQYWNVSENLLPLLASTETNMKDETEVSAPLLPPPSEDNHKPVSLVKGENSPTTASLIHNDNMVPSLDALQVSTQSPALHSSGIATSEEGLTVVNNIAAETRIEAIISAGSVSHQSDLNLQNSVNMSTTVDAAKCSLVKSQLSNCGHANDMGLPLNFSLLNKENTSVGFGKCENNANDDFCYFGFSYKPSSYINCYMHGEFSASAAAKFAMISSEESRSEGHASDSHKKTVSAYTYLQAKAFSLAASRFFWPSSEKKPVEVPRERCGWCISCKANVASKRGCMLNHALISATKSAMKILPKFSPLRSGDGSFPSTIATYILYIEKCLHGLVVGPFINASYRNNWRKQVEQATTLGALKPLLLKLEENIRTVAFCGDWVKLMDDRLVEFSIIQSGTSTQGTSQKRAPSGRRYKKRSSIDEAIDDSSQEGMWWRGGKVTKFIFQNVALPKSMVRKAARQGGSRKISGIIYADGSETPKRSRQLVWRVAVQMSRNASQLALQVRYLDYYLRWSDLIRPEQNIQDGKGQETEASAFRNANICDKKLVDGKICYGIAFGSQKHLPNRVMKSVVEKEQISEGKEKYWFSETRIPLYLVKEYEEGNEKVPCQEHYSGASPLNRRRLKGTCSDILFYLRCKRDNLAFSCSSCQMGISIRNAHKCNACQGYCHEDCSISSVSILSTNGEVERLTTCKQCHRAKLLAPNIISDESPTSPLILQGQENSSGTIFKGPRPKAGHSDTKQVNSMSVSKGSKRKCPDQTVSSTRKIKGHSDAKQAVSDSTKVESSNRRNNNCSWGLIWKNRSNEESTDFRINNILLKGGSNMPDLSPVCNLCTKAYRDDLMYIRCETCQNWFHAEAVELEESKISTLLGFKCCKCRRIKSPVCPYAEPKPMSEVKKSRRRASKKEQSGANSDSGTFNDIRDSEPDTPVFPVESDPLLFSLANVELITESNKLDLGVQWNTASVPVPQKLPVRRHVKHEGDDDGSVAGIPLQAEFSAHCEAGYLSNPADSELPLEYDSAIFDSNLPNNYEFGNDQSFDDDNNNPNLYFDPNELLCTDDGQIDEGQIDEGLINEGQINEGQINEGQIDGGDLSMDLLKYDIENSGAAVPEEFGDFGDFGDFGEFEHNVYCNICLQNVPGLDRFCETCGVLCHSSCLPWPEPVTYVEKWKCMNCRDWQ | 1713 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 133 | 147 | - | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 1429 | 1444 | - | - | |
Tsu02g03715 | 1713 | ProSitePatterns | Zinc finger PHD-type signature. | 420 | 461 | IPR019786 | - | |
Tsu02g03715 | 1713 | Pfam | DDT domain | 196 | 250 | IPR018501 | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 938 | 959 | - | - | |
Tsu02g03715 | 1713 | PANTHER | DNA-BINDING AND ZINC-FINGER PROTEIN | 1 | 1710 | - | - | |
Tsu02g03715 | 1713 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 411 | 466 | IPR013083 | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 1275 | 1295 | - | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 1296 | 1314 | - | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 1248 | 1264 | - | - | |
Tsu02g03715 | 1713 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1361 | 1420 | IPR013083 | - | |
Tsu02g03715 | 1713 | CDD | PHD2_CHD_II | 420 | 461 | - | - | |
Tsu02g03715 | 1713 | PANTHER | PHD FINGER FAMILY PROTEIN | 1 | 1710 | - | - | |
Tsu02g03715 | 1713 | SUPERFAMILY | FYVE/PHD zinc finger | 408 | 467 | IPR011011 | - | |
Tsu02g03715 | 1713 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 298 | 341 | IPR028942 | - | |
Tsu02g03715 | 1713 | ProSiteProfiles | DDT domain profile. | 194 | 254 | IPR018501 | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Tsu02g03715 | 1713 | SMART | testlast3 | 194 | 254 | IPR018501 | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 1426 | 1463 | - | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 132 | 161 | - | - | |
Tsu02g03715 | 1713 | SUPERFAMILY | FYVE/PHD zinc finger | 1362 | 1422 | IPR011011 | - | |
Tsu02g03715 | 1713 | ProSiteProfiles | Zinc finger PHD-type profile. | 417 | 464 | IPR019787 | - | |
Tsu02g03715 | 1713 | SMART | PHD_3 | 1366 | 1414 | IPR001965 | - | |
Tsu02g03715 | 1713 | SMART | PHD_3 | 419 | 462 | IPR001965 | - | |
Tsu02g03715 | 1713 | SMART | PHD_3 | 1182 | 1233 | IPR001965 | - | |
Tsu02g03715 | 1713 | SMART | PHD_3 | 1665 | 1710 | IPR001965 | - | |
Tsu02g03715 | 1713 | Pfam | PHD-finger | 420 | 462 | IPR019787 | - | |
Tsu02g03715 | 1713 | SUPERFAMILY | FYVE/PHD zinc finger | 1658 | 1710 | IPR011011 | - | |
Tsu02g03715 | 1713 | CDD | PHD_TCF19_like | 1366 | 1413 | - | - | |
Tsu02g03715 | 1713 | MobiDBLite | consensus disorder prediction | 1248 | 1326 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g03715 | Tsu-Chr2 | 41987444 | 41998036 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g03715 | 284 | 563 | EF-hand Containing Proteins | AT5G22760 | 49.825 | 6.47e-80 | 288 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Tsu02g03715 | DDT | 4.1e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g03715 | - | - | mtr:MTR_4g055920 | 2152.1 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu02g03715 | 02 | 41987444 | 41998036 | Tsu02g03715 | 02 | 41987444 | 41998036 | ECH |