Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03708 ATGGAAAAATGGGATCTGGCTTCCTTAAAAGTTGGAATTGATTGCATTCGCAATGGCTCAGAACAAGGTCTTTCACGGTTTCCAGAACAAAAGCGTAAAATCCATAGGTGGGAGCTCATGGCGACGGTTGTTGAGAAACGAATGGCGTACGATGTGAGGAACCTTATGGGAGAAGATCTTGGCCCTCTGAGCCGTAAAGAGTTAGAGACGCTTGAAAGCCAGCTAGATTCGTCCTTGAAGCAAATAAGATCAACAAGGTTGGTTGAATCTGATGAACAGGAGTTAAAGCATACAGTTCAAACCACCAAAGCTGGTATGCAGGTCATGCAAATGAAATTTCATGAGGAGTTCTCCAATTTAGGCATGCACATTCACGATTTTGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTTCTggatatgattttttattttttttag 471 0.4034 MEKWDLASLKVGIDCIRNGSEQGLSRFPEQKRKIHRWELMATVVEKRMAYDVRNLMGEDLGPLSRKELETLESQLDSSLKQIRSTRLVESDEQELKHTVQTTKAGMQVMQMKFHEEFSNLGMHIHDFAHAASGYHRVLEENRKLYNEVLDMIFYFF 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03708 156 Pfam K-box region 50 99 IPR002487 GO:0003700|GO:0005634|GO:0006355
Tsu02g03708 156 PANTHER KINESIN-LIKE PROTEIN KLP-3 78 151 - -
Tsu02g03708 156 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 78 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03708 Tsu-Chr2 41916644 41920724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03708 53 86 MADS-box Gene Family AT1G24260 82.353 1.50e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03708 K10406 - cit:102618812 112.079