Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03695 atggAGAGAAAAGCGATCAACAATGATTACAGTTCAGAAGACGAAGGAACTCAACACTATAGACGTGGTGGTTACCATCCGGTTAAAATTGGTGATACTTTCAACAATGCTCGTTATGTTGTTCAATCTAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTTGCTTCGGATACTCTCAAATCGcgTTATGTGGCCCTTAAAATTCAAAAGAGCGCGCAACACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATTGAAGAGGGAGACCCTGATGACAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCTAATGGCATACACGTGTGTATGGTTTTTGAATTCCTTGGTGATAATCTTCTCACCCTTATCAAATATAGTGACTACCGTGGAGTTCCTCTTTCCATGGTTAAAGAAATATGTTTTCATATTTTGGTGGGCTTGGATTATTTGCACCGTGAGCTTTCTGTTATACACACTGATTTGAAGCCGGAGAATGTGTTGCTTCTTTCACTGATAGATCCGTGTAAGGATCCAAGGAAATCAGGTGCTCCACTTATCCTTCCAAACACCAAGGATAAGGCTTTGTCTAATAATGGCACTATCCAAAACAGTAAAATTGGGAATGGAGATCCGACAAAGaaccagaaaaagaaaatgcaGGGAAATGCTAAGAGGGTGGCTCAAGGCTGTATTGAGAAGGAAAGTCCAGAGGAAGCTGGGGAGGACTTTAAAGAACCCGAGCACGAAAATCGTAAAAATCATGTGAAATCAAGTGTAGAATCTTCTGAAAATAAACCCAATAGTTCTTTCAGTGAGGGTGAATCAACACAAACTTTTGAAAAGGATGCCGCACAAGGAAATCATGGTCATAGGAAAGGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACTTATAAACAGTTCACAAGTGATATTCAGACAAGGCAATATAGGTGTCCCGAGGTTCTTCTTGGATCTAAATACTCTACTCCAGCTGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACTGGAGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAACTTCTTGGAAAGATGCCTAGCAAGATTGCACTTGGTGGCCGTTATTCCCGAGAATTTTTTAATCGACATGGTGAATTGAGGCACATTCGCGACTTGCGATTCTGGCCACATCATAAGATTCTGACGGAGAAGTATAATTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTTCGTCCAATACTTGATTTTGACCCTGAAAAGAGACCAACAGCTGCTCAGTGCCTTAGCCATCCATGGTTCAGTGCAGGACCCAGAACTCTTGAGCCCTCACTGACTAGTATGCAACCTGATGGAATCAACAGGGATTCatttgaaaagagaaagaaggaaAAGGCTGAGCACGAGTTGGTGGAAATTGGTGTGAAGAATATAGCCATTGATGGATCTCCTGTGTCACTCAAAGACTCCCAACCTGTAAAGTCATCAACATAG 1629 0.4095 MERKAINNDYSSEDEGTQHYRRGGYHPVKIGDTFNNARYVVQSKLGWGHFSTVWLASDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIEEGDPDDKKCVVKLLDHFKHSGPNGIHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLIDPCKDPRKSGAPLILPNTKDKALSNNGTIQNSKIGNGDPTKNQKKKMQGNAKRVAQGCIEKESPEEAGEDFKEPEHENRKNHVKSSVESSENKPNSSFSEGESTQTFEKDAAQGNHGHRKGSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPSKIALGGRYSREFFNRHGELRHIRDLRFWPHHKILTEKYNFSEQDANDMADFLRPILDFDPEKRPTAAQCLSHPWFSAGPRTLEPSLTSMQPDGINRDSFEKRKKEKAEHELVEIGVKNIAIDGSPVSLKDSQPVKSST 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03695 542 MobiDBLite consensus disorder prediction 201 226 - -
Tsu02g03695 542 MobiDBLite consensus disorder prediction 240 269 - -
Tsu02g03695 542 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 540 - -
Tsu02g03695 542 MobiDBLite consensus disorder prediction 270 293 - -
Tsu02g03695 542 CDD STKc_SRPK 27 479 - -
Tsu02g03695 542 MobiDBLite consensus disorder prediction 1 22 - -
Tsu02g03695 542 PANTHER SERINE KINASE-LIKE PROTEIN 8 540 - -
Tsu02g03695 542 Pfam Protein kinase domain 316 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03695 542 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03695 542 Gene3D Transferase(Phosphotransferase) domain 1 122 480 - -
Tsu02g03695 542 Gene3D Phosphorylase Kinase; domain 1 15 121 - -
Tsu02g03695 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Tsu02g03695 542 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Tsu02g03695 542 MobiDBLite consensus disorder prediction 192 306 - -
Tsu02g03695 542 SUPERFAMILY Protein kinase-like (PK-like) 34 491 IPR011009 -
Tsu02g03695 542 ProSiteProfiles Protein kinase domain profile. 39 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03695 542 SMART serkin_6 39 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03695 Tsu-Chr2 41688451 41692747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03695 8 528 EF-hand Containing Proteins AT5G22840 65.900 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Tsu02g03695 Pkinase 7.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03695 K08832 - gmx:100790060 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03695 02 41688451 41692747 Tsu02g03695 02 41688451 41692747 ECH
Tsu02g04649 02 55496609 55501236 Tsu02g03695 02 41688451 41692747 PCT