Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03646 atgacactAGAAATCAAAAAGCTTAAGAATAATATTGTGTTCAAAAAGCTTCAAAAGACAATCTTAAAGGGAATAAATGATGATAAATCAAGGTATGTGGCAAAGGATGTGAAAAAAGGACATTTTGTTGTGATTGCTGAGGATGAAGAGGAAACAAAGAGATTTGTTGTGCCATTAAGATGTTTAACAAATCCATTATTTATGAGCTTATTGGAACAAGCAGCTGAAAAATATGGATTTGATGGAGATGGTGCAGTAATTGTTCCTTGTAGAACTAATGAGCTTCAAATGTTATTGGTACAGCAAAGGCATGAAGAAGGAAGTTTTTGTTCTAATCAAGTCATGTTTAAATGCTACCAAAGAGGGCCTAGTGTACAGTTCAATTTAAAGCAAATTATATCTAGAGGTTTttag 414 0.3164 MTLEIKKLKNNIVFKKLQKTILKGINDDKSRYVAKDVKKGHFVVIAEDEEETKRFVVPLRCLTNPLFMSLLEQAAEKYGFDGDGAVIVPCRTNELQMLLVQQRHEEGSFCSNQVMFKCYQRGPSVQFNLKQIISRGF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03646 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 18 106 IPR003676 GO:0009733
Tsu02g03646 137 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 18 106 - -
Tsu02g03646 137 Pfam Auxin responsive protein 31 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03646 Tsu-Chr2 41004796 41005209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03646 29 99 Calmodulin-binding Proteins AT3G43120 39.437 3.92e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03646 - K14488 cam:101490087 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03646 02 41004796 41005209 Tsu02g03646 02 41004796 41005209 ECH
Tsu02g05124 02 60277749 60278228 Tsu02g03646 02 41004796 41005209 PCT