Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03629 ATGCATGGAGTAACTGGAAGAGAACAAACCTTCATATCATCAGTTGCTTCACCTATGGTTCCAACTGACACCACTGCCAAATTTGCACTACCAGTTGATTCGGAACACAAATCCAAAGTATTCAAACTCTTTTCACTAGCCAACCCTCACATGAGAACTTTCCATTTATCATGGATATCTTTTTTCACCTGTTTCGTCTCAACTTTCGCTGCTGCACCGCTTGTCCCTATAATCCGCGACAACCTTAACCTCACGAAAGCAGACGTAGGTAACGCCGGTGTTGCTTCGGTTTCAGGTAGTATTTTCTCAAGGTTAACAATGGGTGCAGTATGTGACTTATTAGGTCCACGTTATGGTTGTGCATTTCTTATTATGCTAACTGCACCGACAGTGTTTTGTATGTCATTTGTTGAAGATGCAGCTGGTTATATAGCAGTTAGGTTTATGATTGGTTTTTCATTGGCAACATTTGTTTCATGTCAATATTGGATGAGTACTATGTTTAATAGTAAGATTATTGGACTTGTTAATGGTACTGCTGCTGGTTGGGGTAATATGGGTGGTGGGGCCACTCAACTTATTATGCCTTTGGTTTATGAGTTGATTAGGAGATGTGGTGCTACTCCTTTCACTGCTTGGAGAATTGCCTTTTTTATCCCTGGTTGGTTGCATGTTATCATGGGTATTTTGGTCTTAACTTTAGGCCAAGATTTACCTGATGGTAACCTTGGTGCTTTACAGAAGAAGGgttttgatatttctttttttctttcttttcaggTCTTATGGTATGCTATAACAAATTACAGGACATGGGTTTTTGCTCTTCTTTATGGTTACTCAATGGGAGTTGAATTAACAACTGATAATGTCATTGCTGAGTATTTCTATGACAGGTTTAACCTAAAGCTACACACAGCTGGAATCATTGCAGCTTCATTCGGAATGGCAAACCTAATCGCTCGTCCATTCGGCGGATATGCATCAGATTTTGCAGCCAGGTTATTTGGCATGAGAGGAAGGTTATGGACACTATGGATTCTACAAACTCTTGGAGGAGTTTTCTGCATATGGTTAGGACGTGCGAATACACTACCAATTGCGGTACTATCAATGATTATGTTCTCAGTTGGAGCACAAGCTGCATGCGGTGCAACATTTGGAATCATTCCATTCATATCAAGACGATCTTTGGGGATTATATCAGGTTTAACAGGTGCAGGTGGAAACTTTGGTTCTGGATTAACACAATTAGTGTTTTTCTCAAGCTCAAAATTCTCAACATCAACTGGTCTATCATTGATGGGTGCAATGATTGTAGCTTGCACATTACCTGTGACTCTTGTTCATTTTCCACAGTGGGGAAGCATGTTTTTTCCACCTTCAAAAGAGACTAGTGAAGAACATTATTACACTTCTGAATGGAATGAGGATGAGGTACAGAAAGGATTGCATCAATCAAGTCTTAGGTTTGCTGAGAATAGTAAATCTGAGAGAGGTAAACGTGTGGCTTCTGCAGCAACTCCACCAAATACAACTCCTAGCCATTAG 1551 0.3965 MHGVTGREQTFISSVASPMVPTDTTAKFALPVDSEHKSKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKADVGNAGVASVSGSIFSRLTMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVEDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIRRCGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGFDISFFLSFQVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANLIARPFGGYASDFAARLFGMRGRLWTLWILQTLGGVFCIWLGRANTLPIAVLSMIMFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSSSKFSTSTGLSLMGAMIVACTLPVTLVHFPQWGSMFFPPSKETSEEHYYTSEWNEDEVQKGLHQSSLRFAENSKSERGKRVASAATPPNTTPSH 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03629 516 MobiDBLite consensus disorder prediction 491 516 - -
Tsu02g03629 516 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 513 - -
Tsu02g03629 516 Gene3D MFS general substrate transporter like domains 258 456 IPR036259 -
Tsu02g03629 516 CDD MFS_NRT2_like 54 448 IPR044772 GO:0015112
Tsu02g03629 516 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 513 IPR044772 GO:0015112
Tsu02g03629 516 Pfam Major Facilitator Superfamily 58 415 IPR011701 GO:0022857|GO:0055085
Tsu02g03629 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 53 448 IPR020846 GO:0022857
Tsu02g03629 516 Gene3D MFS general substrate transporter like domains 47 242 IPR036259 -
Tsu02g03629 516 SUPERFAMILY MFS general substrate transporter 48 449 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03629 Tsu-Chr2 40799812 40801853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03629 1 516 Inorganic Solute Cotransporters AT1G08090 78.613 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03629 K02575 - gmx:100807710 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03629 02 40799812 40801853 Tsu02g03629 02 40799812 40801853 ECH