Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03626 ATGGGCCTCAAGACAATGAAGGATGAGTCTTGGGTCAGTACAAAACAGTTCTCCCTCAAGTTGTTAGCCCCGATGACTTTTTGCACTGTTGGACCACAACTAGTTTCTTCTCAGAAAAATGCAGGTGGTGGTGCTGGTGGTGCCGGTCTTGAGGATATAGTCGCGAAAGAAATGTATAAAGGCTTGTCTGGTTATACAGATGTTTTCAAAGctacaataaaaaaagagtTGGGTTATTGCATAGTTGATGTGGATGCTGATTGGGATGGTGCCTTTAATTTCACCAAAGATCTCACATTTTTGTCTATGTGTGCCCAAGATATGAAAGGAGATATTTCACAAAGGATGTGCACATCAGCAGAAATAGAAGCCTATGCGAGAAGTTTTGCTGCAGGAGACAAGTCTGCAGGGTCTGGAAGAACCAAAGCAAACTACTTGAAGCCAAACAAAAACTGTAATTTGAGTTCTTGGGTTAATGGATGTGAACCTGGTTGGGGATGTAAAGCTAATGATAAAGTTGATGCTAATAGTAATAAGAAGGAAATACCTGTTAGATCTGTTGATTGCAAACCTTGTTGTGAAGGTTTCTTTTGTCCTCGCGGCATCACCTGCATGATACCTTGTCCTTTGGGATCTTATTGTCCGCGTGGGGAACTAAATAAAACTAGTGGAATATGTGCACCATATCGTTATCAGTTACCTCCCGGAAAAGCTAACCATAGTTGTGGAGGAGCAGATATTTGGGCTGACATTACAAGTAGTAGCGAGGTATTCTGTTCAGCAGGATCATATTGTCCATCTACAATCGTAAAAAATCCTTGCAGTAGAGGGTATTACTGCAGAAAAGGTTCTACAGCTCAAGAGAGATGTTTCAAGCTAGCTAGTTGTGAGCCGAAATCAGCAAATCAAAATATTACTGCTTATGGTCTCCTGGTTTTTGCCGGCTTGTGTTTTATGCTGATTATTATATACAACTGTTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCGAAATCAAGAGAAAGAGCTGCTGCAAGTGTAAGAGAAACACAAGCGCGCGAAAAATGGAAATCTGCAAAAGATATTGCTAAGAAGCATGCTACAGGACTACAATCACAATTATCGCGTACATTTTCGcgcaaaaaaacaaataaaatgccAGATTTCAAAGGTGTGTTACCACCTATGGGAGCTGGAgcaaaaggaaagaaaaaggataaaaacgacctctcaaaaataataaatgatatTGAGCAAGATCCTGATAGTCAAGAAGGGTTCAATGTTCAAATAGGagataaaaatgtgaaaaaacaAGCACCAAGGGGTAAGGCTTTGCATACTCAGAGTCAAATTTTCAAGTATGCATATGGTcagattgaaaaagaaaaggcaATGCAGGAACAAAATAAGAACTTAACATTCTCCGGAGTGATTTCAATGGCTAGTGACATTGATATAAGGAAAAGGCCTACAATTGAGGTTGCTTTTAAAGACTTAACACTCACTTTGAAAGGGAAAAACAAACATCTATTGAGATGTGTGACTGGTAAGTTACATCCCGGTCGAGTTTCTGCTGTCATGGGTCCGTCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAGCTGGATGCCACACAACTGGTCAAGTTCTTGTAAATGGTCAGGAATCTTCTATTCGATCATTCAAGAGGATCATTGGCTTTGTTCCACAAGATGATATTGTCCATGGCAATTTGACAGTGGAGGAGAATCTGTGGTTTAGTGCCAGATGCAGACTCTCGGCCGATCTACCGAAAGAAGAGAAGGTGTTAGTGGTTGAAAGAGTCATTGAATCTTTGGGTCTTCAGGCAATAAGGGATTCTTTGGTTGGGACAGTGGAGCAACGAGGAATCTCTGGAGGTCAAAGGAAGAGAGTAAACGTTGGACTAGAAATGGTTATGGAACCTTCTCTTCTAATTTTGGATGAACCTACATCTGGTTTGGACagttcatcttctcaattaCTGCTTAGAGCACTTAGACGTGAGGCTCTTGAAGGCGTAAACATATGTATGGTCCTTCACCAACCGAGCTACACATTGTTCAGGATGTTTGATGATTTTATACTGCTTGCTAAAGGAGGCCTTACAGTGTATCATGGACCTGTTAACAAAGTCGAAGAGTACTTCTCTGGCATGGGGATTGTTGTCCCTGACCGTGTAAATCCTCCAGATTACTACATTGACATTTTAGAAGGAATAATAAAACCAAGTGCAAGCTCAGGAGTGACCCATAAACAACTACCAGTTAGATGGATGCTTCATAATGGATATCCTGTGCCTATGGATATGCTGCAACTTATAGAAGGAATGGCTACTCCAACTGGTAGCATTCCAACACAAGCAGGACCTAACCCTAATGCAAAGCTTACTGCCGCGCCTTCTTTTGCCGGAGAACTTTGGCAGGATGTGAAGTGCAACGTTGAGATGAAGAGAGACAACCTTCAACTCAATTTCTTAGCTTCAAATGATTTGTCCAATAGGAATACACCCGGATCTTTCCAACAATACAAATACTTTCTTGGAAGGCAACAGCGGTTGCGAGAAGCTAGAACACAAGCTGTAGATTTTCTGATTCTGTTGCTAGCTGGTGTTTGCTTAGGAACACTTGCCAAAGTGAGCGATGAATCATTTGGAGCAACTGGTTATACATACACCGTAATTGCAGTATCACTCCTTTCCAAGATTGCAGCTTTGAGATCGTTCTCGTTGGATAAGTTGCATTACTGGAGAGAAAGTGCTTCAGGGATGAGTAGCCTTGCTTACTTTCTCTCAAAAGATACAGTTGACCATTTCAGTACACTTATCAAACCCCTAGTTTATCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTTTCACAGATAACTACTTTGTTCTATTATGTTTGGTGTATTGTGTTACCGGCATTGCTTATGTGTTGGCAATCTTCCTTGAACCAGGTCCAGCCCAGCTGTGGTCGGTGTTACTACCAGTAGTTTTGACTCTCCTAGCAACTTACGAAAACGAAGAGGATAGCAGTTATGTCGCTTTTCTATCTGATTTGTGCTACACCAAATGGGCTCTTGAAGCATTTGTTATATCAAATGCTAAAAGATATTCTGGTGTTTGGCTAATAAGCCGATGTGGTGCACTCAACTCATACGGCTATGATCTCAAACATTGGTACCAATGTTTAGCACTCCTTGTTTTGACAGGAATAATTAGCCGCATGCTTGCATTTTTCTGTATGATGACCTTCCAGAAGAAATAG 3318 0.3963 MGLKTMKDESWVSTKQFSLKLLAPMTFCTVGPQLVSSQKNAGGGAGGAGLEDIVAKEMYKGLSGYTDVFKATIKKELGYCIVDVDADWDGAFNFTKDLTFLSMCAQDMKGDISQRMCTSAEIEAYARSFAAGDKSAGSGRTKANYLKPNKNCNLSSWVNGCEPGWGCKANDKVDANSNKKEIPVRSVDCKPCCEGFFCPRGITCMIPCPLGSYCPRGELNKTSGICAPYRYQLPPGKANHSCGGADIWADITSSSEVFCSAGSYCPSTIVKNPCSRGYYCRKGSTAQERCFKLASCEPKSANQNITAYGLLVFAGLCFMLIIIYNCSDQVLATRERRQAKSRERAAASVRETQAREKWKSAKDIAKKHATGLQSQLSRTFSRKKTNKMPDFKGVLPPMGAGAKGKKKDKNDLSKIINDIEQDPDSQEGFNVQIGDKNVKKQAPRGKALHTQSQIFKYAYGQIEKEKAMQEQNKNLTFSGVISMASDIDIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKAAGCHTTGQVLVNGQESSIRSFKRIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEQRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSGMGIVVPDRVNPPDYYIDILEGIIKPSASSGVTHKQLPVRWMLHNGYPVPMDMLQLIEGMATPTGSIPTQAGPNPNAKLTAAPSFAGELWQDVKCNVEMKRDNLQLNFLASNDLSNRNTPGSFQQYKYFLGRQQRLREARTQAVDFLILLLAGVCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTLIKPLVYLSMFYFFNNPRSSFTDNYFVLLCLVYCVTGIAYVLAIFLEPGPAQLWSVLLPVVLTLLATYENEEDSSYVAFLSDLCYTKWALEAFVISNAKRYSGVWLISRCGALNSYGYDLKHWYQCLALLVLTGIISRMLAFFCMMTFQKK 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03626 1105 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 497 738 IPR003439 GO:0005524
Tsu02g03626 1105 ProSitePatterns ABC transporters family signature. 638 652 IPR017871 GO:0005524
Tsu02g03626 1105 Pfam ABC transporter 517 666 IPR003439 GO:0005524
Tsu02g03626 1105 MobiDBLite consensus disorder prediction 379 409 - -
Tsu02g03626 1105 CDD ABCG_EPDR 495 721 - -
Tsu02g03626 1105 Gene3D - 487 733 IPR027417 -
Tsu02g03626 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 498 734 IPR027417 -
Tsu02g03626 1105 MobiDBLite consensus disorder prediction 341 361 - -
Tsu02g03626 1105 SMART AAA_5 523 724 IPR003593 -
Tsu02g03626 1105 Pfam ABC-2 type transporter 695 1105 IPR043926 GO:0140359
Tsu02g03626 1105 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 49 1101 - -
Tsu02g03626 1105 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 49 1101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03626 Tsu-Chr2 40731830 40739653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03626 524 717 Calmodulin-binding Proteins AT2G36910 28.643 1.27e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03626 - - gmx:100794093 1812.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03626 02 40731830 40739653 Tsu02g03626 02 40731830 40739653 ECH