Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03617 ATGAAGTTGCAGATCAAAATTGCTCTTGCTATTGTTATTAGTTTGCTCTGGATTCAACATTCTCTTTGTGATGAAGCATCTGATACATCTGGCCTAAACAAGTGGAAATGTAAATGTTCTTCTTTTGAAGGGAACCAAAGCAACTATCTTGCTAATTGTTCGAAATCATGTGATTGCCATTCAGATTCTGAAGGGGGTGCATCCATATGGATATGCATATGCGATCCCGATGGATTTCCCCATGTGGCAGAGGATGGTCATAGCTCTAATTGCTTTCGTGCCTGCAACTGCACCTGGGGAACTGTCGGCACATCATCAGGTTCAAAGAAACACATTTCCAGCAAGGTTGTTGTAATTATCCTATTGATATGTGTTATATGCACAACCATTGCGCTGCTTACCTCAGTTGTATGCTACATCTACCGAAGGGACAGATCCACTAATCAATCACCAATATTTTCATCAGATAAGGATACGAGTAGTGGTAGTACCACCAACCTAATCAGTTATAGGACAGGAACTTCTTCAGTGCCAGAAACAAAACTTTTTATAAATTCTCCTATTTATCATTTCACAGGATGCTTTCAGAAAGCCTCTTTTTTGTTTGGGAGCCAAAAAGAAACTTTTCATGGaaatattattcaattttcATTTGCTGAACTGGAAAGTGCCACTGATAACTTTTCAGCTACCAACCTTATTGGATTAGGCGGGAGTAGTTATGTATACCGTGGTCGGCTGAAAGATGGTAATATTGTGGCTGTTAAGCGACTAAAAGATCATGGAGGGCCAGAAGCAGACTCTGCATGTTTCAAGGAGATTGAACTATTAGCTAGACTTCATCATTGTCATTTGGTGCCGTTGCTTGGATACTGCTTAGAATCGAAAGGAAAACATGTTCAGAGGTTACTAGTATTTGAGTACATGATTAACGGGAATTTGAGGGACTGTTTAGACGGAGTTTCTGGAAAATATATGGATTGGACTACTCGTGTTACGATTGCAATAGGAGCAGCAAGGGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAAGATTCTTCATAGAGATGTGAAATCAACCAACATTCTTCTGGACAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGAGATCCGATGACCTACCAAGCTGTTCAGGTTCTCCAGCAAGAATGCAGGGGACATTTGGCTATTTTGCACCCGAGTATGCTATTATTGGTAGAGCCTCACTTGAATCAGATGTTTTCAGTTTTGGTGTGGTTCTTCTCGAGCTTATTAGTGGTCGACATCCTATCCATAAAACTTCAGGCAAAGAAGAAAGCCTCGTTATATGGGTACtttaa 1359 0.4003 MKLQIKIALAIVISLLWIQHSLCDEASDTSGLNKWKCKCSSFEGNQSNYLANCSKSCDCHSDSEGGASIWICICDPDGFPHVAEDGHSSNCFRACNCTWGTVGTSSGSKKHISSKVVVIILLICVICTTIALLTSVVCYIYRRDRSTNQSPIFSSDKDTSSGSTTNLISYRTGTSSVPETKLFINSPIYHFTGCFQKASFLFGSQKETFHGNIIQFSFAELESATDNFSATNLIGLGGSSYVYRGRLKDGNIVAVKRLKDHGGPEADSACFKEIELLARLHHCHLVPLLGYCLESKGKHVQRLLVFEYMINGNLRDCLDGVSGKYMDWTTRVTIAIGAARGLEYLHEAAAPKILHRDVKSTNILLDKNWQAKITDLGMAKNLRSDDLPSCSGSPARMQGTFGYFAPEYAIIGRASLESDVFSFGVVLLELISGRHPIHKTSGKEESLVIWVL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03617 452 Pfam Protein kinase domain 231 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03617 452 ProSiteProfiles Protein kinase domain profile. 228 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03617 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Tsu02g03617 452 Gene3D Transferase(Phosphotransferase) domain 1 309 452 - -
Tsu02g03617 452 SMART serkin_6 228 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03617 452 PANTHER OS01G0253100 PROTEIN 2 451 IPR045271 GO:0004714|GO:0006468
Tsu02g03617 452 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Tsu02g03617 452 Gene3D Phosphorylase Kinase; domain 1 202 308 - -
Tsu02g03617 452 SUPERFAMILY Protein kinase-like (PK-like) 209 444 IPR011009 -
Tsu02g03617 452 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03617 Tsu-Chr2 40591213 40597417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03617 1 452 Receptor kinase-like Gene Family AT2G28250 52.954 1.03e-155 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Tsu02g03617 Pkinase 5.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03617 - - gmx:100817870 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03617 02 40591213 40597417 Tsu02g03617 02 40591213 40597417 ECH
Tsu02g05105 02 60060358 60064418 Tsu02g03617 02 40591213 40597417 PCT