Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03595 ATGCCTGGAATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCTATTTCACAAAGTGGTGGCGGAGTGGCAGCTCGAGCATGCGGTCTTGTTAGTTTAGAACCAACGAAGATTGCAGAGATCCTTAAAGATCGTTTATCTTGGTTTCGAGAATGTCGGAACCTAGAAGTTTTCACAATGTTTCCTGCCGGAAATGGAGGAACCGTTGAGCTTGTTTACACACAGACATATGCTCCAACAACGCTAGCTCCTGCTCGGGATTTCTGGACGCTGAGATACACTACAACTTTGGAGAATGGTAGTATTGTGGTCTGTGAGAGGTCCCTGTCCGGTTCTGGCACTGGCCCTAATCCGGCTGTTGCTGCTCAGTTTGTAAGGGCCGAAACACTCCCGAGTGGCTACTTGATTCGACCATGCGATGGTGGAGGTTCAATCATCCACATTGTAGACCATCTAAATCTTGAGCCGTGGAGTGTTCCAGAAGTGCTACGGCCACTTTATGAATCACCAAAAGTGGTGGCTCAAAAAATGACCATTGCGGCACTTCGATATATTAGGCAAATAGCTCAGGAATCAAGTGGTGAAGTGGTATATGGATTGGGTAGACAGCCTGCTGTTTTGCGAACATTCAGCCAAAGATTGAGCAGGGGCTTCAATGATGCTGTAAATGGATTCAGTGACGATGGTTGGTCTATACTAAACTGTGACGGCGCTGAGGATGTAATTATTGCTGTTAATTCAACCAAGAATTTGAGTAGCACTTCTAATCCAGCAAGTTCCCTTACATTCCTTGGAGGAATTCTCTGCGCAAAAGCTTCTATGTTGCTCCAAAACGTTCCTCCTGCAGTTTTGGTTCGCTTTTTAAGGGAGCACCGCTCAGAATGGGCTGATTTCAATGTCGATGCTTATTCTGCTGCATCATTGAAAGCTGGAAACTATGCCTATCCAGGGATGAGGCCTACAAGATTCACAGGCAATCAAGTAATCATGCCTCTTGGCCATACTATTGAACATGAAGAGaTGCTTGAAGTTATTAGGCTTGAAGGCCACTCTCTTGCACAAGAAGATGCTTTTGTTTCTAGGGACATTCATCTCTTACAGATATGCAGTGGAACCGATGAGAACGCTGTTGGGACTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCAGATGACGCTCCATTGGTACCTTCTGGTTTCCGTATCATACCATTGGAATCAAAACCAGGTGATAAGAAGGATACAGCGAATTCAAACCGGACCCTGGATTTGACTTCAGGTCTTGAAGTGGGCCCAGCAACAACTCACGGTGGCGCAGATTCATCATCAAGTCAAAACACACGATCAGTGTTGACTATTGCCTTTCAGTTTCCTTTTGACAACACTATGCAAAATAATGTTGTAATCATGGCTCGCCAATATGTTCGTAGTGTGATTTCCTCAGTGCAAAGGGTTGCCATGGCTATATCTCCGTCTGGTATCAACCCAGCTGTCGGTGCAAAACTTTCTCCCGGTTCTCCAGAAGCAGTTACATTAGCTCATTGGATCTGTCAGAGTTATAGTTACTATTTGGGGTCCGACTTGCTCAGATCAGATTCTCTTGTCGGCGACTTGATGCTAAAACAGCTGTGGCATCACCCTGACGCTATTCTATGTTGTTCACTGAAGTCTCAGCCAGTGTTCGTGTTTGCAAATCAAACTGGCCTTGACATGTTGGAAACAACTCTAGTGGCTTTACAAGACATCACGTTGGATAAAATATTTGACGAGTCGGGTCGCAAGGCTTTGTGTGCAGATTTTGCGAAGTTAATGCAACAGGGGTTTGCTTATCTGCCAGCTGGGATCTGCATGTCGACGATGGGGCGGCACGTTTCTTACGAGCAAGCCATTGCATGGAAAGTGCTTACAGCAGATGATAACACTGTTCATTGCTTAGCTTTCTCTTTCATAAATTGGTCATTTGTATGA 1977 0.4532 MPGMKPGPDSVGIFAISQSGGGVAARACGLVSLEPTKIAEILKDRLSWFRECRNLEVFTMFPAGNGGTVELVYTQTYAPTTLAPARDFWTLRYTTTLENGSIVVCERSLSGSGTGPNPAVAAQFVRAETLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVLRPLYESPKVVAQKMTIAALRYIRQIAQESSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFSDDGWSILNCDGAEDVIIAVNSTKNLSSTSNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGNYAYPGMRPTRFTGNQVIMPLGHTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGTDENAVGTCSELIFAPIDEMFPDDAPLVPSGFRIIPLESKPGDKKDTANSNRTLDLTSGLEVGPATTHGGADSSSSQNTRSVLTIAFQFPFDNTMQNNVVIMARQYVRSVISSVQRVAMAISPSGINPAVGAKLSPGSPEAVTLAHWICQSYSYYLGSDLLRSDSLVGDLMLKQLWHHPDAILCCSLKSQPVFVFANQTGLDMLETTLVALQDITLDKIFDESGRKALCADFAKLMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLTADDNTVHCLAFSFINWSFV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03595 658 MobiDBLite consensus disorder prediction 409 448 - -
Tsu02g03595 658 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 658 IPR044830 GO:0003700
Tsu02g03595 658 Gene3D - 15 195 IPR023393 -
Tsu02g03595 658 SUPERFAMILY Bet v1-like 5 190 - -
Tsu02g03595 658 Pfam MEKHLA domain 514 657 IPR013978 -
Tsu02g03595 658 Pfam START domain 2 186 IPR002913 GO:0008289
Tsu02g03595 658 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 658 - -
Tsu02g03595 658 SMART START_1 1 188 IPR002913 GO:0008289
Tsu02g03595 658 ProSiteProfiles START domain profile. 24 197 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03595 Tsu-Chr2 40327827 40333585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03595 1 658 Homeobox Transcription Factor Family AT5G60690 80.995 0.0 1120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03595 K09338 - gmx:100804870 1233.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03595 02 40327827 40333585 Tsu02g03595 02 40327827 40333585 ECH