Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03571 ATGTTAGATAAGACTCTTTCTTATGTGAGAGATATTTTGACCTGTAACTGCTTCGGGTTTTTGAAGAGACAGAACCCTCGAAAGGTTACACCTACGATCTACAATAATAATCTCTCCCAGGAGCTGTTGTTAGAtagtgattttgatgatgaagattcCTTCTTTAATGATGAGATTATTAACAACTCTAGTGGAAACGATGATGAGGAGCAAAGTCGTCCCAAGCGATCGGAggaaattttggtttttagagTAGAAAATGATATGATCTGCAGACAGTTTCCTGTTAAAGAGACTCACAAAATTGATCGCACAGAGGATGAAAATGGAAATAAGGCAGTAAATGAGTATGTTCGTGAGTATAAGATTGGTTCTGGTAGCTACGGGAAAGTGGCTCTTTATCGAAGCTGTGTTGATGGAAAACATTATGCAATTaagGCCTTTCATAAGTCTCATTTATTGAAGCTTCGAGTTGCACCCTCAGAAACGGCCATGACTGATGTTCTTCGTGAGGTTTTCATTATGAAAATGCTGCAACATCCTAATATAGTCAATCTCATTGAAGTGATTGATGACCCAGAATCGGATAACTTCTACATGGTACTTGAATATGTAGAAGACAAATGGGTTTGCGATGGTTCAGGTCGAGCTTGTAGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGACATAGTTTCTGGATTAATGTATCTCCATGCTCATAATATAGTTCATGGGGATATCAAACCTGACAATCTGTTGATTACTCGTCATGGTACAGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATATGCTTCGACGATCACCTGGCACTCCTGTTTTCACTGCACCTGAATGTATTTTAGATATTACTTACAGTGGTAAAGCCGCTGACACATGGGCTGTAGGAGTTACTTTATACTGTATGGTATTGGGTGATTACCCTTTTCTTGGTGACACACTTCAAGATACATATGACAGAATAGTCAATACTCCGATAGTGCTCCCAGAGGATCTGAATCCACGGTTGAAGCACTTGATAGAAGGACTACTTTGCAAAGACCCAAAACAAAGGATGACGTTGGCTGATGTCGCGGCGGATAGCTGGGTTATTGGAAAAGATGGGCCAATTCTTGAGTACTTCTGTTGGTGCAAAAGGAAGAACTCGGAGAAGGAAGACAATGATGAGAGCAAGCAGGATGCTTCCCTTACCTATACTGACTGA 1248 0.3958 MLDKTLSYVRDILTCNCFGFLKRQNPRKVTPTIYNNNLSQELLLDSDFDDEDSFFNDEIINNSSGNDDEEQSRPKRSEEILVFRVENDMICRQFPVKETHKIDRTEDENGNKAVNEYVREYKIGSGSYGKVALYRSCVDGKHYAIKAFHKSHLLKLRVAPSETAMTDVLREVFIMKMLQHPNIVNLIEVIDDPESDNFYMVLEYVEDKWVCDGSGRACSLGEETARRYLRDIVSGLMYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDNDMLRRSPGTPVFTAPECILDITYSGKAADTWAVGVTLYCMVLGDYPFLGDTLQDTYDRIVNTPIVLPEDLNPRLKHLIEGLLCKDPKQRMTLADVAADSWVIGKDGPILEYFCWCKRKNSEKEDNDESKQDASLTYTD 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03571 415 Gene3D Phosphorylase Kinase; domain 1 111 212 - -
Tsu02g03571 415 SMART serkin_6 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03571 415 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Tsu02g03571 415 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 408 - -
Tsu02g03571 415 CDD STKc_LKB1_CaMKK 123 378 - -
Tsu02g03571 415 Pfam Protein kinase domain 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03571 415 Gene3D Transferase(Phosphotransferase) domain 1 213 404 - -
Tsu02g03571 415 ProSiteProfiles Protein kinase domain profile. 117 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03571 415 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 408 - -
Tsu02g03571 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Tsu02g03571 415 SUPERFAMILY Protein kinase-like (PK-like) 113 390 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03571 Tsu-Chr2 40133710 40138115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03571 112 377 CBL-interacting serine-threonine protein kinases AT5G35410 33.083 2.12e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Tsu02g03571 Pkinase 1.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03571 K00908 - gmx:100789178 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03571 02 40133710 40138115 Tsu02g03571 02 40133710 40138115 ECH