Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03563 ATGGTGTCTAAGATGGATCAATACGAGATCATGAAACAGATCGGCTGCGGTGCATTTGGTGCTGCAATTCTTGTTAATCATAAATTGGAGAAGAAGAGatATGTGTTGAAGAAAATTAGGCTTGCGCGGAAAACGGACGGACCGGTCAAATCTGTCAGCAGCATCTCTTTGTTTTATACTTCAGAAACTAAAGAACTAGCTCATGTACGAGTCAACTTTATAGCAGGCATGGTTGGAAGCATTAAAGCTTGCTTTGGAATTGGGGGATGGTTTTATAGAATTGGATCTCAAGCAAATTGA 300 0.4033 MVSKMDQYEIMKQIGCGAFGAAILVNHKLEKKRYVLKKIRLARKTDGPVKSVSSISLFYTSETKELAHVRVNFIAGMVGSIKACFGIGGWFYRIGSQAN 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03563 99 ProSitePatterns Protein kinases ATP-binding region signature. 14 44 IPR017441 GO:0005524
Tsu02g03563 99 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 3 51 - -
Tsu02g03563 99 SUPERFAMILY Protein kinase-like (PK-like) 4 83 IPR011009 -
Tsu02g03563 99 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Tsu02g03563 99 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5 3 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03563 Tsu-Chr2 40005102 40006399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03563 5 85 Core Cell Cycle Gene Families AT3G48750 32.927 1.03e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03563 K08857 - ming:122058030 81.6481