Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03521 ATGGATCATTTCACAGATAAATTACCGGCAATGGATCTCATGCGTTCCGAGAAGATGACCTTCGTTCAACTCATCATTCCTGCCGAGTCCGCTCACTGTTGCATTACCTATTTAGGCCAACTCGGTCTTCTTCAATTTCGTGACTTAAATTCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGgTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGGTTCCTCATGGATCAGATCAATAAAGCTGGGATAAAATCTTCCCTTTCTGTCTTGGAATCAGATACACACTTGGAGGATATAGAGACGCAACTTTCTGAGCATGAACACGAGATAATTGAAATGAACTCTAACAGTGAGAAACTTCAGCAATCATATAATGAACTCCTTGAGTTCAAGATTGTACTGCAAAAGGCATGCAGTTTTCTTGTTTCAAGTCATGGCCAGACCATTTCAGAAGAGAGAGAACTGGAGGAGAATGTTTACTCAAATGGCGACTTTGTTGAGACACCATTTTTGTTTGAACAGGAAATTATGCCTGgaccatcaaaatcaaaccaatcTAGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAAGTTCTCAGGTTTGAAAGGATGTTGTTTCGTGCCACAAGGGGCAATATGCTTTTCAATCAGGCACCAACCGATGAACAAATTATGGATCCTATTTCAGCTgagatgGTTGAGAAGACTGTGTTTGTTGTGTTTTTCTCTGGAGAGCAAGCAAGAAGAAAGATTCTGAAAATTTGTGAAGCATTTGGTGCAAATTGTTACCCTGTTCCTGAAGATATAAGTAAACAAACGCAAATAACTCAGGAGGTTTCATCACGCCTTGCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTATCTTCTGTAGGAGGTCATTTAGAAAATTGGATGGACATGGTAAGAAGAGAGAAGGCTGTATATGATACGCTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGCAGAGGGGTGGTGTCCAATATTTGCAAAAACACAGATTCAGGATGCACTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTGGGGGTAATCTTTCATTCAATGGATGCAATGGAATCGCCACCAACATATTTTAGGACCAACAATTTCACAAATCCATATCAAGAAATTGTAGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCAGCAGTTTACACAACGATTATATTCCCGTTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGCTGCTTGGAGCATTGGTTCTTATAGCACATGAAAGAAAGCTCAGCAATCAGCGACTGGGAAGCTTTATGGAGATGCTATTTGGTGGACGCTATGTGATTCTTTTGATGTCACTATTTTCAATGTATTGCGGGTTAATCTACAATGAATTCTTCTCGGTTCCTTTTCACATATTTGGTGCGTCTGCTTACAAATGCCGAGATATGTCATGCAGGGATGCACATACTACTGGCTTAATAAAATACAGAGAACCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCCTTTCTAAATTCTCTCAAGATGAAGATGTCCATTCTGTTTGGTGTGGTACATATGAACTTAGGAATTATGTTAAGTTACTTCAATGCTTGTTTCTTTGGCAGTTCACTGGATATAAGGTATCAGTTCGTGCCGCAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTGCTCATTGTTGTCAAGTGGTGTACTGGCTCTCAGGCAGATCTTTATCATATAATGATTTACATGTTTTTAAGCCCCTTTGACAAGCTTGGCGAGAATGAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTTTGTTATTGCTTCTGGCTCTAATTGCAGTTCCATGGATGCTCTTTCCAAAGCCTTTTATATTAAAGAAACTTCATAATGAGAGATTTGAAGGGCGCAATTACGGTGTTCTTCATACCTCTGAGGTAGATCTTGAGGGGGAACCGGATTCTGCCAGGGCCATGCAACATCATGATGAATTTAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTGGGTTCTGTTTCAAATACGGCATCATATCTCCGACTTTGGGCATTAAGCTTGGCTCACTCTGAGCTTTCAACTGTTTTTTATGAGAAAGTCCTGCTACTAGCATGGGGGTATGACAATCTTGCCATTCGGTTAGTGGGGCTAGTTGTTTTTTCATTTGCAACTGCTTTTATACTACTTATGATGGAGACTCTGAGCGCTTTTCTTCACGCCCTGCGACTTCATTGggttgaatttcaaaataaattctacCATGGTGATGGCTACAAATTCAGACCTTTTTCCTTTGCCACCTTAGCAGATGATGAAAATTGA 2469 0.3965 MDHFTDKLPAMDLMRSEKMTFVQLIIPAESAHCCITYLGQLGLLQFRDLNSEKSPFQRTFVNQVKRCAEMSRKLRFLMDQINKAGIKSSLSVLESDTHLEDIETQLSEHEHEIIEMNSNSEKLQQSYNELLEFKIVLQKACSFLVSSHGQTISEERELEENVYSNGDFVETPFLFEQEIMPGPSKSNQSSLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPTDEQIMDPISAEMVEKTVFVVFFSGEQARRKILKICEAFGANCYPVPEDISKQTQITQEVSSRLADLEATLDAGIRHRNKALSSVGGHLENWMDMVRREKAVYDTLNMLNFDVTKKCLVAEGWCPIFAKTQIQDALQRATFDSNSQVGVIFHSMDAMESPPTYFRTNNFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAVMFGDWGHGICLLLGALVLIAHERKLSNQRLGSFMEMLFGGRYVILLMSLFSMYCGLIYNEFFSVPFHIFGASAYKCRDMSCRDAHTTGLIKYREPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVVHMNLGIMLSYFNACFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHIMIYMFLSPFDKLGENELFWGQRPLQILLLLLALIAVPWMLFPKPFILKKLHNERFEGRNYGVLHTSEVDLEGEPDSARAMQHHDEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLAIRLVGLVVFSFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFATLADDEN 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03521 822 Coils Coil 99 126 - -
Tsu02g03521 822 PANTHER VACUOLAR PROTON ATPASES 6 821 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tsu02g03521 822 PIRSF ATP6V0A1 9 822 IPR026028 GO:0000220|GO:0046961
Tsu02g03521 822 Pfam V-type ATPase 116kDa subunit family 37 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tsu02g03521 822 PANTHER VACUOLAR PROTON ATPASE A1 6 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03521 Tsu-Chr2 39518601 39528601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03521 1 817 Primary Pumps ATPases(2) AT2G28520 78.877 0.0 1325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03521 K02154 - gmx:100800799 1453.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03521 02 39518601 39528601 Tsu02g03521 02 39518601 39528601 ECH
Tsu02g05041 02 59479268 59490000 Tsu02g03521 02 39518601 39528601 PCT