Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03519 ATGCTTTTGTACTTGCAGTACTTTTTGTATCAGATTCTTCGTGGGCTAAGGTATATACATTCTGCAAACATAATCCATAGAGATTTGAAACCAAGCAACCTGTTGTTGAATGCAAATTGTGACTTGAAGATTATTGATTTTGGTCTTGCGCGGCCAACTATGGAAAGTGACTTCATGACAGAATATGTAGTCACAAGATGGTATAGGGCTCCTGAGTTGTTGTTGAATTCCTCAGATTACACTTCTGCTATAGATGTTTGGTCTGTTGGTTGCATTTTTATGGAGCTCATGAATAAAAAGCCTCTGTTTCCTGGCAAAGACCATGTGCATCAGATGCGCTTATTGACAGAGCTTCTTGGCACTCCAACTGATGCTGATGTTGGGTTAGTGAAAAATGAAGATGCAAGAAGATACATCCGACAACTTCCTCAATATCCTCGCCAACCTTTAAATAGGGTTTTCCCCCATGTTCATCCCTTGGCCATTGATCTCGTCGATAAAATGTTGACAATTGATCCTACCAGAAGAATTACAGTTGAAGAAGCACTAGCCCATCCATATCTTGAAAAATTACATGATGTAGCTGATGAACCTATCTGCATGGAGCCATTCTCATTTGAGTTCGAGAAACAACATTTGGACGAAGAGCAAATAAAGGAGATGATCTACAGGGAGGCATTAGCACTCAATCCTGAGTATGCTTAA 705 0.4 MLLYLQYFLYQILRGLRYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPTMESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTDADVGLVKNEDARRYIRQLPQYPRQPLNRVFPHVHPLAIDLVDKMLTIDPTRRITVEEALAHPYLEKLHDVADEPICMEPFSFEFEKQHLDEEQIKEMIYREALALNPEYA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03519 234 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03519 234 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 233 - -
Tsu02g03519 234 Gene3D Transferase(Phosphotransferase) domain 1 3 215 - -
Tsu02g03519 234 Pfam Protein kinase domain 6 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03519 234 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 233 - -
Tsu02g03519 234 SUPERFAMILY Protein kinase-like (PK-like) 4 196 IPR011009 -
Tsu02g03519 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Tsu02g03519 234 SMART serkin_6 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03519 Tsu-Chr2 39504976 39508689 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03519 4 234 MAP Kinase Gene Family AT3G45640 82.251 2.46e-145 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu02g03519 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03519 K20536 - gmx:100801339 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03519 02 39504976 39508689 Tsu02g03519 02 39504976 39508689 ECH