Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03511 ATGAACAATAATGTTGGGAAAAAGAGTCTGGTAGAACAAAATCACGTGCTTATTGACAGAAAGAGTCTAAATAATAGAGTAGTTAAGGAAGGGCCGGGCTCTGAATCATCAACTGAAAATGACACAAGATTTAGTAAGGTAACCAAAGATGAAAACAATGGGTTGAAGGGATCGGTTCAAATCCATGAGAGGTTGCAGATTTCACAACAACCACCACCTCGAAATCCAGTTACATACTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGCGGACGATGATGATTCAACACGCAATGTTGTGTGTGCACTGTTAAGGAATTGTGGTTATGAAGTCACTGCTGTTTCGAATGGTCTCCAAGCGTGGCAAACTCTAGAAGATCCAGAAAATCACATTGATCTTGTTCTAACCGAGGTAGCTATGCCTTTTGTATCTGGAATAAGTCTTTTGTGCAAGATCATGAGCCACATATCACTGAAGAATATTCCTGTGATTATGATGTCTTCTCACGATTCTATGGGTATAGTCTTTAAGTGCTTGTCAAAAGGTGCAGCTGATTTTTTAGTGAAACCTATTCGAAGGAATGAACTTAAAAACATCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGTGATAGTGGGAGTGAAAGTGGGACAAACACCCGGAAATTTGCAAAGTCGAGAAGCATTTGTGCATATGACAACAATAGTGGTAGCAATGATGAGAATGATTATGGAAGCAGCAGAGGCTTGAGTCTTCGAGATGGAAGTGACAAAGGAAGTGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAATCTCATGATACTCCTGATAGCACATGTGCTCAAGTGATGTATACAAAGCCTGAAAACAGTAGTAGTGTGCAGATCCATGCCACAGAAAAAGAGTGCCATGAACGGATCGATCATGCTGATGAGATTGCAATGGGTAAAGATTTAGCAATGGGAATATCTTTGAACATGAAAGAAAACCATCCACTTAAGGAACTGCCTAACAATCCAATGCATAAAGGGGTTAGTAAGATGTCTGATATCGATGGTATGCAACTCATTAAAGGACATAGTAATGTCTGTGAAAAAGTACAACTGGAAGACGGCAGTGATAAAACCAGAATGCAGGAAAATCAGGCTATGAATGTTGGTGTTACTGATAGCAGCAGTCCACAGGCTGAAAGCAGAGATTTGAACACTTCAAATGGTTTTTCTGGTTTTGCCAAAACAAAAGCAAGTTGTTGCTTCGAACAGCATCCATCACTTGACCTAACATTAAAAAGGATGGGAGAAGTAAAAGATGCTGAACATGTCACAGGTGATGAAAGTAATGTTTTGAGACATTCAGATCTGTCAGCATTCTCCAAATATAATACAGCTTCTGCTTACCAGGCTCAAACTGGAAATGTGGGAAGCTGTTCCCCACTAGACAATAGCTCAGTTGCACCAAATACAGAGACAATGCAGAACTTCACATCGCATTCAAATGCCACTCCTCCAAATCAACAGTCTAATGGGAGCAACAACATCAATGACCTGGCCTACACTAATGTATATCTTAGCACCAAACATGAAAATTTTGACAAGAAACCCGAGTCTGCCAGAGGGATTGGCTCTTTTATTTCTTCTGAACTTCAAACCGTGCAAAATAATAGTATCTCTGCATCTCAGAAGAAGACTTCTTCTCAGGAAGAATGTGCCGGAATCATTAAAGGACAGGTAGGAGGCTCTGAACAAGGATTCCAATTCGAGCACACTCACCAACAACTTCAACATTGTAATCGCATCGCACACAAGACTGCAGAGGATCTCCAATCAGTTCATGATCTCTTACATAAAAGCACGACCAAAGTTGCTCAGCAATGCATGTCATCAAATGTGTTTGGAGGGCCTGAAGAAGGTAATGCTGCTGCAAACTATGGTTTGGATGGAAGTGCAGCTGAGAGTGATCATGGGAGCAACGGACAGGGTGGAAGCAACACTTTGACAATCAGAATGACAAATATGGAAAATGGCGATGCGGCAGCTGGGAGCTTTGGAGTTGGTGGCattgataaaataaacattGGAAGTGTGTCATATGAAGAACGAGTTGCATTGAGAGAGGCTGCCTTGACAAAATTTCGActaaagagaaaagaaagatgCTTTGAGAAGAAGGTTAGATATCACAGCAGGAAAAAGTTGGCAGACCAGCGGCCACGTATTAGGGGACAATTTGTCAAACAAATAGTGTCTGACactaaagaagaagaaaataaagaaagcGAGGACCTTGTATCTATGGATAATTCTAGCGATGTTCCACAGCAATACCAATCAAAATGCTGA 2358 0.402 MNNNVGKKSLVEQNHVLIDRKSLNNRVVKEGPGSESSTENDTRFSKVTKDENNGLKGSVQIHERLQISQQPPPRNPVTYWEKFLPVTSIKVLLADDDDSTRNVVCALLRNCGYEVTAVSNGLQAWQTLEDPENHIDLVLTEVAMPFVSGISLLCKIMSHISLKNIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNIWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSNDENDYGSSRGLSLRDGSDKGSGTQSSWTTNLAQSHDTPDSTCAQVMYTKPENSSSVQIHATEKECHERIDHADEIAMGKDLAMGISLNMKENHPLKELPNNPMHKGVSKMSDIDGMQLIKGHSNVCEKVQLEDGSDKTRMQENQAMNVGVTDSSSPQAESRDLNTSNGFSGFAKTKASCCFEQHPSLDLTLKRMGEVKDAEHVTGDESNVLRHSDLSAFSKYNTASAYQAQTGNVGSCSPLDNSSVAPNTETMQNFTSHSNATPPNQQSNGSNNINDLAYTNVYLSTKHENFDKKPESARGIGSFISSELQTVQNNSISASQKKTSSQEECAGIIKGQVGGSEQGFQFEHTHQQLQHCNRIAHKTAEDLQSVHDLLHKSTTKVAQQCMSSNVFGGPEEGNAAANYGLDGSAAESDHGSNGQGGSNTLTIRMTNMENGDAAAGSFGVGGIDKINIGSVSYEERVALREAALTKFRLKRKERCFEKKVRYHSRKKLADQRPRIRGQFVKQIVSDTKEEENKESEDLVSMDNSSDVPQQYQSKC 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03511 785 MobiDBLite consensus disorder prediction 261 282 - -
Tsu02g03511 785 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
Tsu02g03511 785 MobiDBLite consensus disorder prediction 756 785 - -
Tsu02g03511 785 MobiDBLite consensus disorder prediction 22 52 - -
Tsu02g03511 785 MobiDBLite consensus disorder prediction 756 770 - -
Tsu02g03511 785 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR3 30 746 - -
Tsu02g03511 785 MobiDBLite consensus disorder prediction 242 282 - -
Tsu02g03511 785 Pfam CCT motif 710 752 IPR010402 GO:0005515
Tsu02g03511 785 MobiDBLite consensus disorder prediction 771 785 - -
Tsu02g03511 785 MobiDBLite consensus disorder prediction 648 671 - -
Tsu02g03511 785 SMART REC_2 89 204 IPR001789 GO:0000160
Tsu02g03511 785 Gene3D - 88 246 - -
Tsu02g03511 785 SUPERFAMILY CheY-like 88 215 IPR011006 -
Tsu02g03511 785 PANTHER TWO-COMPONENT RESPONSE REGULATOR 30 746 IPR045279 GO:0009736
Tsu02g03511 785 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Tsu02g03511 785 MobiDBLite consensus disorder prediction 477 519 - -
Tsu02g03511 785 CDD psREC_PRR 91 194 - -
Tsu02g03511 785 ProSiteProfiles CCT domain profile. 710 752 IPR010402 GO:0005515
Tsu02g03511 785 ProSiteProfiles Rhodanese domain profile. 103 134 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03511 Tsu-Chr2 39346488 39352754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03511 36 470 Response Regulator Gene Family AT5G60100 44.170 7.69e-83 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Tsu02g03511 Response_reg 2.6e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03511 K12129 - gmx:100785796 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03511 02 39346488 39352754 Tsu02g03511 02 39346488 39352754 ECH