Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03506 ATGGAAGCATTTACAAGAGATCATCGAGGTTCACTTGAAGTCTTCAATCCATCTTCATCCGACATCAACGACCAGAATCCGAATTCAAATCCAGTCAATTCATGGAACAATTGGACGACAAACTCACGCGCCAATgaaactcaacaacaacaaacgcGCGACTCAATTAACTCCGATGAAGTCACCGTCGCAACTTCCTGGATGGCACTGAAGGAAACAACTCCTCCTCCGTCAATTTCCGGTAATTCCGGCTCCGCTGCGGCACAAAGAGCAGCCGAGTGGGGATTAGTATTGAAAACTGATTCAGAGACAGGAAAACCACAGGGAGTGGCAGTTAGAAGTTCCGGTGGTGGTTCGAGAAGAGACTCGAATAATTCGATGAGAAGCTCCGGTGAGAGTTCCGATGACGGAAGAGAGTTTAGAGGGATACCGAGAGTTTCGGAGGATTTGAGAGATGCGTTATCGGCATTTCAACAGACATTTGTTGTATCCGATGCTACCAAACCCGATTACCCGATTATGTATGCTAGTGCCGGGTTTTTTAATATGACGGGTTATACTTCTAAAGAAGTCATTGGAAGAAATTGTCGGTTTATGCAGGGAGCTGATACGGATCCGAATGATGTGGCAAAGATAAGAGAAGCTTTAGCAGCAGGAACAACCTATTGTGGAAGGTTACTAAATTACAAGAAGGATGGGACACCCTTTTGGAACCTTCTCACTATTGCTCCTATCAAGGATGAACATGGCAAAATCCTCAAACTTATTGGAATGCAAGTAGAGGTTAGCAAGCATACAGAGGGGACCAAGGAGAAGATGTTACGTCCTAATGGATTGCCCGAATCCTTGATTCGATATGATGCTCGTCAAAAAGAAAAGGCAAACTCATCAGTAAGTGAGTTAGTGGAAGCAGTGAGCAAAAGACCACGGTCACTCAGTGAATCAACAAACCATCTTCCTTTCATCAAAACCCCAACAAGTGTACTACGCGGTGGTAAAAATGATCATGCAACAAAACTACACAAAAAACTATCCAATTCCTCAAGGAGAAAATCTGAGAGTACTTTACCTTCATTTAGACGTAAATCACATTCTGGATCAGGAGTTGACACTTTTAATTCAATGCAATCCATCACCGAGACTCccgaaaacaaaaacaactggCGCCGCCGTTCTTTCATGGGGTTGATTAGGAAAAGTCAATCAAACAATGAAAGCTTCAATGATGATGAACAAGTTATTGATGAGGATAGCTCTGAGGATGATGAAAGGTCTGATAGTTTTGAagacaaaatcacaaaaaagaaggaaaagagaAAGGGTCTTGATCTTGCTACCACACTTGAACGTATCGAAAAGAACTTTGTCATTACTGATCCAAGGCTCCCTGATAACCCCATTATCTTTGCATCTGATAGCTTCTTAGAGCTTACAGAGTATTCTCGTGAAGAAATATTGGGAAGAAATTGCAgGTTTCTGCAAGGACCTGAAACAGATCCTGCAACAGTGAAAAAAATTAGACATGCTATTGACAATCAAACAGAAGTTACTGTGCAACTTATTAATTATACAAAGAGTGGTAAAAAGTTTTGGAACCTATTTCATTTGCAGCCAATGCGTGATCAGAAGGGAGAGGTACAATATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGCATTGCAGATGATACAGCAAAGGAGGGAgaaaatttgGTAAAAAAAACTGCAGAAAATGTTGATGATGCATTGAGAGAATTACCAGATGCTAATATGAAACCAGAAGATCTATGGATGAATCACTCAAAAGTTGTTCTCCCTAAACCTCATAGGAGGGAAGATGTTGCTTGGAGAGCTATTCAGAATATCATGGAGAGTGGAGAGCAGATAGGCTTGAAGCATTTTAAGCCAATTAAACCTTTAGGCTCAGGCGACACCGGAagTGTTCATCTGGTGGAGCTATGTGGAACAAATCAACAGTTTGCCATGAAGGCTATGGAGAAGAGTGTTATGCTCAATCGTAATAAGGTGCATAGAGCTTGCACAGAAAGAGAAATCCTTGACATGTTGGACCATCCTTTTCTTCCTGCATTGTATGCTTCTTTTCAGACCAAAACACATATTTGTTTGATAACTGATTACTGTCCTGGAGGAGAACTATTCTTGCTTCTTGAGCGTCAGCCAGCAAAGGTTCTCAAGGAAGATGCAGTGAGATTTTATACCTCTGAAGTAGTTGTTGCATTGGAGTACCTTCATTGTCAAGGTATAATATATCGAGATttgaagccagaaaatgtgtTACTACAAAGCAGTGGACATGTGTCTCTAACAGATTTTGATTTGTCATGTTTAACATCTTGCAAACCACAGctTTTGATTCCAACTACAAATGACAAGAAGAAAGGTCAACAAGCTCCAATATTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCACCGGAAATTATAACTGGGTCTGGTCATACTAGTGCTGTTGATTGGTGGGCTCTTggaATTCTTCTCTATGAAATGTTTTATGGATATACACCATTTAGAGGAAAGAATAGGCAAAGaacattttcaaatattcttcacAAGGATCTTAAATTTCCCAAAAGTAAACAGATAAGTCTCAGTGCaaaacaattgatttatcactTGTTGCAAAGAGATCCAAGTAGCAGATTGGGTTCAAAGGGAGGAGCAAATGATATTAAGAATCATTCATTCTTCAGAGGTGTCAACTGGGCCTTAGTTAGATGCACGAAACCTCCTGAACTTGATGCTCCTCTCTTTGATACAAATggagaaaaaatggaaaatgaagCCAAATATATAGATAATGGCCAAGAGGATATGAGTGTCTTTTGA 2913 0.3845 MEAFTRDHRGSLEVFNPSSSDINDQNPNSNPVNSWNNWTTNSRANETQQQQTRDSINSDEVTVATSWMALKETTPPPSISGNSGSAAAQRAAEWGLVLKTDSETGKPQGVAVRSSGGGSRRDSNNSMRSSGESSDDGREFRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIREALAAGTTYCGRLLNYKKDGTPFWNLLTIAPIKDEHGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVSELVEAVSKRPRSLSESTNHLPFIKTPTSVLRGGKNDHATKLHKKLSNSSRRKSESTLPSFRRKSHSGSGVDTFNSMQSITETPENKNNWRRRSFMGLIRKSQSNNESFNDDEQVIDEDSSEDDERSDSFEDKITKKKEKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRHAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIADDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKVVLPKPHRREDVAWRAIQNIMESGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTNQQFAMKAMEKSVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLERQPAKVLKEDAVRFYTSEVVVALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLIPTTNDKKKGQQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKNRQRTFSNILHKDLKFPKSKQISLSAKQLIYHLLQRDPSSRLGSKGGANDIKNHSFFRGVNWALVRCTKPPELDAPLFDTNGEKMENEAKYIDNGQEDMSVF 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03506 970 Gene3D Transferase(Phosphotransferase) domain 1 725 936 - -
Tsu02g03506 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Tsu02g03506 970 Coils Coil 572 592 - -
Tsu02g03506 970 PANTHER PHOTOTROPIN-1 97 966 - -
Tsu02g03506 970 SUPERFAMILY Protein kinase-like (PK-like) 624 944 IPR011009 -
Tsu02g03506 970 MobiDBLite consensus disorder prediction 359 383 - -
Tsu02g03506 970 SUPERFAMILY PYP-like sensor domain (PAS domain) 456 555 IPR035965 -
Tsu02g03506 970 Pfam PAS domain 463 555 IPR000014 -
Tsu02g03506 970 Pfam PAS domain 167 263 IPR000014 -
Tsu02g03506 970 ProSiteProfiles PAS repeat profile. 440 513 IPR000014 -
Tsu02g03506 970 MobiDBLite consensus disorder prediction 99 141 - -
Tsu02g03506 970 ProSiteProfiles PAS repeat profile. 146 216 IPR000014 -
Tsu02g03506 970 CDD PAS 455 555 IPR000014 -
Tsu02g03506 970 SMART pac_2 517 559 IPR001610 -
Tsu02g03506 970 SMART pac_2 223 265 IPR001610 -
Tsu02g03506 970 CDD PAS 173 262 IPR000014 -
Tsu02g03506 970 Pfam Protein kinase domain 643 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03506 970 ProSitePatterns Protein kinases ATP-binding region signature. 647 670 IPR017441 GO:0005524
Tsu02g03506 970 MobiDBLite consensus disorder prediction 1 58 - -
Tsu02g03506 970 ProSiteProfiles PAC domain profile. 514 568 IPR000700 -
Tsu02g03506 970 MobiDBLite consensus disorder prediction 409 424 - -
Tsu02g03506 970 PANTHER FLIPPASE KINASE 1-RELATED 97 966 - -
Tsu02g03506 970 Gene3D PAS domain 429 593 - -
Tsu02g03506 970 MobiDBLite consensus disorder prediction 117 131 - -
Tsu02g03506 970 MobiDBLite consensus disorder prediction 339 430 - -
Tsu02g03506 970 SMART serkin_6 641 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03506 970 SMART pas_2 148 217 IPR000014 -
Tsu02g03506 970 SMART pas_2 442 511 IPR000014 -
Tsu02g03506 970 TIGRFAM sensory_box: PAS domain S-box protein 465 555 IPR000014 -
Tsu02g03506 970 TIGRFAM sensory_box: PAS domain S-box protein 173 266 IPR000014 -
Tsu02g03506 970 ProSiteProfiles Protein kinase domain profile. 641 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03506 970 CDD STKc_phototropin_like 639 944 - -
Tsu02g03506 970 MobiDBLite consensus disorder prediction 12 58 - -
Tsu02g03506 970 Gene3D PAS domain 160 319 - -
Tsu02g03506 970 ProSiteProfiles PAC domain profile. 220 274 IPR000700 -
Tsu02g03506 970 SUPERFAMILY PYP-like sensor domain (PAS domain) 166 263 IPR035965 -
Tsu02g03506 970 Gene3D Phosphorylase Kinase; domain 1 640 724 - -
Tsu02g03506 970 MobiDBLite consensus disorder prediction 295 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03506 Tsu-Chr2 39301886 39313143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03506 6 967 AGC Kinase Gene Family AT3G45780 68.969 0.0 1334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g03506 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03506 K20715 - gmx:100804524 1456.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03506 02 39301886 39313143 Tsu02g03506 02 39301886 39313143 ECH
Tsu02g05138 02 60429191 60441219 Tsu02g03506 02 39301886 39313143 PCT