Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03502 ATGAATACCAACTTCAACCTCACATTCTCACGCGCCACTGATACCCACTCCCATTTACCATCGCCATTGCAGCAGCAGCACAACCAACTTGGAGAGTATGACTCAGTCCCACAACTCAGCTCGGAGGTGAGTTATAgtaatggtggtggtggtggtggcgcTGGTGGCAGCGGGTGCAGCAGCTACATGGGATCGCCGAGTAATTATGAGGAGGGATTGATGCAGAGAAGCATTAGTAGCCACTCGCTGCAAAAGAGTGATGGGaaccaccaccatcatcaacacctttttccaaatttttttgctGAATTGGTTGACACCGAGAATGGTTTGGTGCGGCGAGTTTATAGTACCGGTGATCTTGATCAGAGAGTTAATGGATTGCAACAACATTATCATCAATCAGATAGTCCTTTGTCAACAGAAAGTAACATGATAATAGAAGAAATGAGCAGAGCAGCTTGTCCTTATAGCCCAGAGGAAAAGAAGGTCAGGATTGAGAGATATAAAACCAAGAGAAACCAAAggaattacaacaaaaaaattaagTATGTTTGCAGGAAGACATTGGCAGACAGTAGGCCACGTATTAGGGGAAGATTTGCTAAGAATGATGAAACTGTGATCAATCCTCCAAATCAATGGAATGGAGATGAAGTATTAgaagatgaggaagatgaaAATTGGAATAATTTCTTTGATTCATTAGTTCCTACTTCAAATCTTACTCATGAGGAGGAGCCTCAACACAGTTCCTCCTTTGGTATGTTCTACTAA 777 0.3707 MNTNFNLTFSRATDTHSHLPSPLQQQHNQLGEYDSVPQLSSEVSYSNGGGGGGAGGSGCSSYMGSPSNYEEGLMQRSISSHSLQKSDGNHHHHQHLFPNFFAELVDTENGLVRRVYSTGDLDQRVNGLQQHYHQSDSPLSTESNMIIEEMSRAACPYSPEEKKVRIERYKTKRNQRNYNKKIKYVCRKTLADSRPRIRGRFAKNDETVINPPNQWNGDEVLEDEEDENWNNFFDSLVPTSNLTHEEEPQHSSSFGMFY 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03502 258 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 10 258 IPR045281 GO:0009909
Tsu02g03502 258 MobiDBLite consensus disorder prediction 1 25 - -
Tsu02g03502 258 Pfam CCT motif 164 204 IPR010402 GO:0005515
Tsu02g03502 258 PANTHER CCT MOTIF PROTEIN 10 258 - -
Tsu02g03502 258 MobiDBLite consensus disorder prediction 40 59 - -
Tsu02g03502 258 ProSiteProfiles CCT domain profile. 162 204 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03502 Tsu-Chr2 39212547 39216974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03502 154 207 C2C2-CO-like Transcription Factor Family AT5G24930 46.296 1.73e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu02g03502 CCT 5.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03502 - - lang:109352757 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03502 02 39212547 39216974 Tsu02g03502 02 39212547 39216974 ECH
Tsu02g05142 02 60492737 60495282 Tsu02g03502 02 39212547 39216974 PCT